Information for 6-GGAGCCGTTGCCCTGC (Motif 8)

A T C G A T C G C G T A A C T G G T A C A G T C A T C G A G C T A C G T A C T G A G T C A G T C A G T C A C G T A T C G A G T C
Reverse Opposite:
A C T G A T G C C G T A A C T G A C T G A C T G A G T C C G T A C T G A A T G C A C T G A C T G A G T C A C G T A T G C A T G C
p-value:1e-9
log p-value:-2.273e+01
Information Content per bp:1.937
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets71.2 +/- 23.3bp
Average Position of motif in Background63.6 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Spz1/MA0111.1/Jaspar

Match Rank:1
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GGAGCCGTTGCCCTGC
---GCTGTTACCCT--
 A T C G A T C G C G T A A C T G G T A C A G T C A T C G A G C T A C G T A C T G A G T C A G T C A G T C A C G T A T C G A G T C
A C G T A C G T A C G T A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:2
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GGAGCCGTTGCCCTGC
--TGACCTTGACCT--
 A T C G A T C G C G T A A C T G G T A C A G T C A T C G A G C T A C G T A C T G A G T C A G T C A G T C A C G T A T C G A G T C
A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:3
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GGAGCCGTTGCCCTGC
--TGACCTTGACCT--
 A T C G A T C G C G T A A C T G G T A C A G T C A T C G A G C T A C G T A C T G A G T C A G T C A G T C A C G T A T C G A G T C
A C G T A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:4
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GGAGCCGTTGCCCTGC--
---NCCGTTGCTANGNGN
 A T C G A T C G C G T A A C T G G T A C A G T C A T C G A G C T A C G T A C T G A G T C A G T C A G T C A C G T A T C G A G T C A C G T A C G T
A C G T A C G T A C G T G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCCGTTGCCCTGC
CGGAGC-----------
 A C G T A T C G A T C G C G T A A C T G G T A C A G T C A T C G A G C T A C G T A C T G A G T C A G T C A G T C A C G T A T C G A G T C
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:6
Score:0.52
Offset:7
Orientation:forward strand
Alignment:GGAGCCGTTGCCCTGC
-------CTGCCCGCA
 A T C G A T C G C G T A A C T G G T A C A G T C A T C G A G C T A C G T A C T G A G T C A G T C A G T C A C G T A T C G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:GGAGCCGTTGCCCTGC--
--------TGCCCAGNHW
 A T C G A T C G C G T A A C T G G T A C A G T C A T C G A G C T A C G T A C T G A G T C A G T C A G T C A C G T A T C G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

Rfx1/MA0509.1/Jaspar

Match Rank:8
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:GGAGCCGTTGCCCTGC----
------GTTGCCATGGNAAC
 A T C G A T C G C G T A A C T G G T A C A G T C A T C G A G C T A C G T A C T G A G T C A G T C A G T C A C G T A T C G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

PB0055.1_Rfx4_1/Jaspar

Match Rank:9
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GGAGCCGTTGCCCTGC--
---NNCGTTGCTATGGNN
 A T C G A T C G C G T A A C T G G T A C A G T C A T C G A G C T A C G T A C T G A G T C A G T C A G T C A C G T A T C G A G T C A C G T A C G T
A C G T A C G T A C G T G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.50
Offset:7
Orientation:forward strand
Alignment:GGAGCCGTTGCCCTGC
-------ATGCCCACC
 A T C G A T C G C G T A A C T G G T A C A G T C A T C G A G C T A C G T A C T G A G T C A G T C A G T C A C G T A T C G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C