Information for 1-CYCGGAGGGA (Motif 3)

T A G C A G T C T G A C A C T G C T A G T C G A C A T G C T A G T A C G C T G A
Reverse Opposite:
A G C T A T G C G A T C G T A C A G C T G A T C T G A C A C T G T C A G A T C G
p-value:1e-12
log p-value:-2.770e+01
Information Content per bp:1.628
Number of Target Sequences with motif140.0
Percentage of Target Sequences with motif17.33%
Number of Background Sequences with motif4391.8
Percentage of Background Sequences with motif9.32%
Average Position of motif in Targets47.6 +/- 26.2bp
Average Position of motif in Background50.1 +/- 34.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F6/MA0471.1/Jaspar

Match Rank:1
Score:0.76
Offset:2
Orientation:forward strand
Alignment:CYCGGAGGGA---
--GGGCGGGAAGG
 T A G C A G T C T G A C A C T G C T A G T C G A C A T G C T A G T A C G C T G A A C G T A C G T A C G T
A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.74
Offset:3
Orientation:forward strand
Alignment:CYCGGAGGGA---
---GGCGGGAARN
 T A G C A G T C T G A C A C T G C T A G T C G A C A T G C T A G T A C G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:3
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CYCGGAGGGA--
BTKGGCGGGAAA
 T A G C A G T C T G A C A C T G C T A G T C G A C A T G C T A G T A C G C T G A A C G T A C G T
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:4
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CYCGGAGGGA-
-CWGGCGGGAA
 T A G C A G T C T G A C A C T G C T A G T C G A C A T G C T A G T A C G C T G A A C G T
A C G T T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A

E2F4/MA0470.1/Jaspar

Match Rank:5
Score:0.70
Offset:2
Orientation:forward strand
Alignment:CYCGGAGGGA---
--GGGCGGGAAGG
 T A G C A G T C T G A C A C T G C T A G T C G A C A T G C T A G T A C G C T G A A C G T A C G T A C G T
A C G T A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G

PB0204.1_Zfp740_2/Jaspar

Match Rank:6
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CYCGGAGGGA----
ANTNCCGGGGGGAANTT
 A C G T A C G T A C G T T A G C A G T C T G A C A C T G C T A G T C G A C A T G C T A G T A C G C T G A A C G T A C G T A C G T A C G T
C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:7
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CYCGGAGGGA----
--TGGCGGGAAAHB
 T A G C A G T C T G A C A C T G C T A G T C G A C A T G C T A G T A C G C T G A A C G T A C G T A C G T A C G T
A C G T A C G T C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:8
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CYCGGAGGGA--
NTCCCCTCAGGGANT
 A C G T A C G T A C G T T A G C A G T C T G A C A C T G C T A G T C G A C A T G C T A G T A C G C T G A A C G T A C G T
G A C T C G A T G A T C A T G C G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A C G C G T A G C T A G C A T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CYCGGAGGGA--
ATTGCCTGAGGCGAA
 A C G T A C G T A C G T T A G C A G T C T G A C A C T G C T A G T C G A C A T G C T A G T A C G C T G A A C G T A C G T
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CYCGGAGGGA---
---GGCGGGAAAH
 T A G C A G T C T G A C A C T G C T A G T C G A C A T G C T A G T A C G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T