Information for 13-CTAGCCCTTC (Motif 28)

A G T C A C G T C G T A A C T G A G T C A G T C A G T C A C G T A C G T A T G C
Reverse Opposite:
A T C G C G T A C G T A A C T G A C T G A C T G A G T C A C G T G T C A A C T G
p-value:1e-5
log p-value:-1.211e+01
Information Content per bp:1.949
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif38.6
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets58.2 +/- 30.6bp
Average Position of motif in Background55.4 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CTAGCCCTTC
CTAGGCCT--
 A G T C A C G T C G T A A C T G A G T C A G T C A G T C A C G T A C G T A T G C
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CTAGCCCTTC
CNAGGCCT--
 A G T C A C G T C G T A A C T G A G T C A G T C A G T C A C G T A C G T A T G C
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTAGCCCTTC
BNTGDCCTTG
 A G T C A C G T C G T A A C T G A G T C A G T C A G T C A C G T A C G T A T G C
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CTAGCCCTTC-
-----GCTTCC
 A G T C A C G T C G T A A C T G A G T C A G T C A G T C A C G T A C G T A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

Zfx/MA0146.2/Jaspar

Match Rank:5
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CTAGCCCTTC
GGGGCCGAGGCCTG-
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A A C T G A G T C A G T C A G T C A C G T A C G T A T G C
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CTAGCCCTTC----
--KGCCCTTCCCCA
 A G T C A C G T C G T A A C T G A G T C A G T C A G T C A C G T A C G T A T G C A C G T A C G T A C G T A C G T
A C G T A C G T C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CTAGCCCTTC--
--TGACCTTGAN
 A G T C A C G T C G T A A C T G A G T C A G T C A G T C A C G T A C G T A T G C A C G T A C G T
A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

Esrrg/MA0643.1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTAGCCCTTC-
-ATGACCTTGA
 A G T C A C G T C G T A A C T G A G T C A G T C A G T C A C G T A C G T A T G C A C G T
A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CTAGCCCTTC
-CAGCC----
 A G T C A C G T C G T A A C T G A G T C A G T C A G T C A C G T A C G T A T G C
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CTAGCCCTTC-
ACTAGCCAATCA
 A C G T A G T C A C G T C G T A A C T G A G T C A G T C A G T C A C G T A C G T A T G C A C G T
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A