Information for 12-CTGGGGGCAC (Motif 26)

A G T C C G A T A C T G A C T G A C T G A T C G A T C G A G T C C G T A A G T C
Reverse Opposite:
C T A G A C G T A C T G A T G C A T G C A G T C G T A C A G T C C G T A A C T G
p-value:1e-6
log p-value:-1.444e+01
Information Content per bp:1.921
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.60%
Number of Background Sequences with motif331.9
Percentage of Background Sequences with motif0.70%
Average Position of motif in Targets48.3 +/- 25.9bp
Average Position of motif in Background49.4 +/- 33.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

INSM1/MA0155.1/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CTGGGGGCAC
TGTCAGGGGGCG-
 A C G T A C G T A C G T A G T C C G A T A C T G A C T G A C T G A T C G A T C G A G T C C G T A A G T C
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTGGGGGCAC
-NGTGGGCAT
 A G T C C G A T A C T G A C T G A C T G A T C G A T C G A G T C C G T A A G T C
A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T

PB0057.1_Rxra_1/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CTGGGGGCAC----
NTNNNGGGGTCANGNNN
 A C G T A C G T A C G T A G T C C G A T A C T G A C T G A C T G A T C G A T C G A G T C C G T A A G T C A C G T A C G T A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CTGGGGGCAC
TGCCCNGGGGCA-
 A C G T A C G T A C G T A G T C C G A T A C T G A C T G A C T G A T C G A T C G A G T C C G T A A G T C
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T

PB0156.1_Plagl1_2/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CTGGGGGCAC-----
GCTGGGGGGTACCCCTT
 A C G T A C G T A G T C C G A T A C T G A C T G A C T G A T C G A T C G A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

PB0204.1_Zfp740_2/Jaspar

Match Rank:6
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----CTGGGGGCAC--
ANTNCCGGGGGGAANTT
 A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C T G A C T G A C T G A T C G A T C G A G T C C G T A A G T C A C G T A C G T
C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T

PB0133.1_Hic1_2/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CTGGGGGCAC----
NNNNTTGGGCACNNCN
 A C G T A C G T A G T C C G A T A C T G A C T G A C T G A T C G A T C G A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:8
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CTGGGGGCAC
SCCTSAGGSCAW
 A C G T A C G T A G T C C G A T A C T G A C T G A C T G A T C G A T C G A G T C C G T A A G T C
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CTGGGGGCAC
GCCTCAGGGCAT
 A C G T A C G T A G T C C G A T A C T G A C T G A C T G A T C G A T C G A G T C C G T A A G T C
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

THAP1/MA0597.1/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTGGGGGCAC
-TNNGGGCAG
 A G T C C G A T A C T G A C T G A C T G A T C G A T C G A G T C C G T A A G T C
A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G