Information for 9-CAACTGCGGG (Motif 20)

A G T C C T G A G T C A A G T C A C G T A T C G T G A C T C A G C T A G A C T G
Reverse Opposite:
A G T C A G T C A G T C A C T G A T G C G T C A A C T G A C G T A G C T A C T G
p-value:1e-7
log p-value:-1.798e+01
Information Content per bp:1.848
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.98%
Number of Background Sequences with motif151.9
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets45.5 +/- 20.5bp
Average Position of motif in Background51.4 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0150.1_Mybl1_2/Jaspar

Match Rank:1
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----CAACTGCGGG-
CGACCAACTGCCGTG
A C G T A C G T A C G T A C G T A G T C C T G A G T C A A G T C A C G T A T C G T G A C T C A G C T A G A C T G A C G T
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

PB0149.1_Myb_2/Jaspar

Match Rank:2
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----CAACTGCGGG--
CGACCAACTGCCATGC
A C G T A C G T A C G T A C G T A G T C C T G A G T C A A G T C A C G T A T C G T G A C T C A G C T A G A C T G A C G T A C G T
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CAACTGCGGG
CCAACTGCCA-
A C G T A G T C C T G A G T C A A G T C A C G T A T C G T G A C T C A G C T A G A C T G
A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CAACTGCGGG
CGCAGCTGCG--
A C G T A C G T A G T C C T G A G T C A A G T C A C G T A T C G T G A C T C A G C T A G A C T G
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CAACTGCGGG
SNGCACCTGCHS-
A C G T A C G T A C G T A G T C C T G A G T C A A G T C A C G T A T C G T G A C T C A G C T A G A C T G
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CAACTGCGGG
YAACBGCC--
A G T C C T G A G T C A A G T C A C G T A T C G T G A C T C A G C T A G A C T G
A G C T C G T A C G T A A G T C A G T C A C T G G A T C G A T C A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:7
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CAACTGCGGG
NNACAGCTGC---
A C G T A C G T A C G T A G T C C T G A G T C A A G T C A C G T A T C G T G A C T C A G C T A G A C T G
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:8
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CAACTGCGGG
AACACCTGCT--
A C G T A C G T A G T C C T G A G T C A A G T C A C G T A T C G T G A C T C A G C T A G A C T G
G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:9
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CAACTGCGGG
NVCAGCTGBBNN
A C G T A C G T A G T C C T G A G T C A A G T C A C G T A T C G T G A C T C A G C T A G A C T G
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

TCF4/MA0830.1/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CAACTGCGGG
CGCACCTGCT--
A C G T A C G T A G T C C T G A G T C A A G T C A C G T A T C G T G A C T C A G C T A G A C T G
G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T A C G T A C G T