Information for 1-TYCCCCTGTGGAGATG (Motif 2)

C G A T G A T C A G T C A G T C A G T C A G T C A C G T A C T G A C G T A C T G A C T G C T G A A C T G T C G A A C G T A C T G
Reverse Opposite:
A G T C G T C A A C G T A G T C A G C T A G T C A G T C C G T A A G T C C G T A A C T G A C T G A C T G A C T G C T A G C G T A
p-value:1e-13
log p-value:-3.101e+01
Information Content per bp:1.882
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.5 +/- 25.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TYCCCCTGTGGAGATG
-TCCCCTGGGGAC---
 C G A T G A T C A G T C A G T C A G T C A G T C A C G T A C T G A C G T A C T G A C T G C T G A A C T G T C G A A C G T A C T G
A C G T A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TYCCCCTGTGGAGATG
GACCCCCCGCTGTGC--
 A C G T C G A T G A T C A G T C A G T C A G T C A G T C A C G T A C T G A C G T A C T G A C T G C T G A A C T G T C G A A C G T A C T G
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TYCCCCTGTGGAGATG
CACCCCCGGGGGGG---
 A C G T C G A T G A T C A G T C A G T C A G T C A G T C A C G T A C T G A C G T A C T G A C T G C T G A A C T G T C G A A C G T A C T G
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:TYCCCCTGTGGAGATG
-------GTGGAT---
 C G A T G A T C A G T C A G T C A G T C A G T C A C G T A C T G A C G T A C T G A C T G C T G A A C T G T C G A A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TYCCCCTGTGGAGATG
CCCCCCCGGGGGGGT--
 A C G T C G A T G A T C A G T C A G T C A G T C A G T C A C G T A C T G A C G T A C T G A C T G C T G A A C T G T C G A A C G T A C T G
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T A C G T A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TYCCCCTGTGGAGATG
CCCCCCCGGGGGGGT--
 A C G T C G A T G A T C A G T C A G T C A G T C A G T C A C G T A C T G A C G T A C T G A C T G C T G A A C T G T C G A A C G T A C T G
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T A C G T A C G T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TYCCCCTGTGGAGATG
ATTGCCTGAGGCGAA-
 C G A T G A T C A G T C A G T C A G T C A G T C A C G T A C T G A C G T A C T G A C T G C T G A A C T G T C G A A C G T A C T G
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TYCCCCTGTGGAGATG
-CCCCCTGCTGTG---
 C G A T G A T C A G T C A G T C A G T C A G T C A C G T A C T G A C G T A C T G A C T G C T G A A C T G T C G A A C G T A C T G
A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TYCCCCTGTGGAGATG
----GCTGTG------
 C G A T G A T C A G T C A G T C A G T C A G T C A C G T A C T G A C G T A C T G A C T G C T G A A C T G T C G A A C G T A C T G
A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TYCCCCTGTGGAGATG
ATTCCCTGAGGGGAA-
 C G A T G A T C A G T C A G T C A G T C A G T C A C G T A C T G A C G T A C T G A C T G C T G A A C T G T C G A A C G T A C T G
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A A C G T