Information for 11-GAGAATTCCAGGGCCA (Motif 17)

A C T G C G T A A C T G C G T A C T G A C G A T A G C T A G T C A T G C C G T A A C T G A C T G A T C G A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A T G C A G T C A G T C A C G T A T C G C T A G C T G A G C T A A G C T A C G T A G T C A C G T A G T C
p-value:1e-8
log p-value:-1.946e+01
Information Content per bp:1.927
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.6 +/- 23.7bp
Average Position of motif in Background68.7 +/- 5.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GAGAATTCCAGGGCCA
--GCATTCCAGN----
 A C T G C G T A A C T G C G T A C T G A C G A T A G C T A G T C A T G C C G T A A C T G A C T G A T C G A G T C A G T C C G T A
A C G T A C G T C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G A C G T A C G T A C G T A C G T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:2
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GAGAATTCCAGGGCCA
--RCATTCCWGG----
 A C T G C G T A A C T G C G T A C T G A C G A T A G C T A G T C A T G C C G T A A C T G A C T G A T C G A G T C A G T C C G T A
A C G T A C G T C T G A T G A C C T G A A C G T C G A T A G T C A G T C G C T A C T A G T A C G A C G T A C G T A C G T A C G T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GAGAATTCCAGGGCCA
--RCATTCCWGG----
 A C T G C G T A A C T G C G T A C T G A C G A T A G C T A G T C A T G C C G T A A C T G A C T G A T C G A G T C A G T C C G T A
A C G T A C G T C T A G T G A C C G T A C G A T C G A T A G T C G T A C C G T A A T C G A T C G A C G T A C G T A C G T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:4
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------GAGAATTCCAGGGCCA
TTGACCGAGAATTCC-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G T A C T G A C G A T A G C T A G T C A T G C C G T A A C T G A C T G A T C G A G T C A G T C C G T A
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GAGAATTCCAGGGCCA--
---AAGTTCAAGGTCAGC
 A C T G C G T A A C T G C G T A C T G A C G A T A G C T A G T C A T G C C G T A A C T G A C T G A T C G A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:6
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GAGAATTCCAGGGCCA
------NTCAAGGTCA
 A C T G C G T A A C T G C G T A C T G A C G A T A G C T A G T C A T G C C G T A A C T G A C T G A T C G A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.53
Offset:8
Orientation:forward strand
Alignment:GAGAATTCCAGGGCCA--
--------CAAGGHCANV
 A C T G C G T A A C T G C G T A C T G A C G A T A G C T A G T C A T G C C G T A A C T G A C T G A T C G A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.53
Offset:6
Orientation:forward strand
Alignment:GAGAATTCCAGGGCCA
------BTCAAGGTCA
 A C T G C G T A A C T G C G T A C T G A C G A T A G C T A G T C A T G C C G T A A C T G A C T G A T C G A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

PB0138.1_Irf4_2/Jaspar

Match Rank:9
Score:0.51
Offset:-6
Orientation:reverse strand
Alignment:------GAGAATTCCAGGGCCA
GNNACCGAGAATNNN-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G T A C T G A C G A T A G C T A G T C A T G C C G T A A C T G A C T G A T C G A G T C A G T C C G T A
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.50
Offset:7
Orientation:forward strand
Alignment:GAGAATTCCAGGGCCA-
-------CAAAGGTCAG
 A C T G C G T A A C T G C G T A C T G A C G A T A G C T A G T C A T G C C G T A A C T G A C T G A T C G A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G