Information for 2-CCACCGGGTR (Motif 6)

A G T C A G T C C G T A A T G C G A T C A T C G A C T G C T A G G C A T C T A G
Reverse Opposite:
G A T C C G T A A G T C A G T C A T G C C T A G A T C G C G A T A C T G A C T G
p-value:1e-10
log p-value:-2.348e+01
Information Content per bp:1.730
Number of Target Sequences with motif76.0
Percentage of Target Sequences with motif9.39%
Number of Background Sequences with motif1981.2
Percentage of Background Sequences with motif4.14%
Average Position of motif in Targets51.4 +/- 23.7bp
Average Position of motif in Background49.0 +/- 33.0bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0103.1_Zic3_1/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---CCACCGGGTR--
NCCCCCCCGGGGGGN
 A C G T A C G T A C G T A G T C A G T C C G T A A T G C G A T C A T C G A C T G C T A G G C A T C T A G A C G T A C G T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:2
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----CCACCGGGTR-
NTCCCCTCAGGGANT
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A T G C G A T C A T C G A C T G C T A G G C A T C T A G A C G T
G A C T C G A T G A T C A T G C G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A C G C G T A G C T A G C A T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CCACCGGGTR-
GCCTCAGGGCAT
 A C G T A G T C A G T C C G T A A T G C G A T C A T C G A C T G C T A G G C A T C T A G A C G T
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

PB0102.1_Zic2_1/Jaspar

Match Rank:4
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CCACCGGGTR--
ACCCCCCCGGGGGGN
 A C G T A C G T A C G T A G T C A G T C C G T A A T G C G A T C A T C G A C T G C T A G G C A T C T A G A C G T A C G T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:5
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CCACCGGGTR-
SCCTSAGGSCAW
 A C G T A G T C A G T C C G T A A T G C G A T C A T C G A C T G C T A G G C A T C T A G A C G T
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:6
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----CCACCGGGTR-
NTCGCCTCAGGCAAT
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A T G C G A T C A T C G A C T G C T A G G C A T C T A G A C G T
G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:7
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CCACCGGGTR
TGCCCNGGGGCA
 A C G T A C G T A G T C A G T C C G T A A T G C G A T C A T C G A C T G C T A G G C A T C T A G
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

PB0101.1_Zic1_1/Jaspar

Match Rank:8
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CCACCGGGTR--
CCCCCCCGGGGGNN
 A C G T A C G T A G T C A G T C C G T A A T G C G A T C A T C G A C T G C T A G G C A T C T A G A C G T A C G T
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CCACCGGGTR-
TCCCCTGGGGAC
 A C G T A G T C A G T C C G T A A T G C G A T C A T C G A C T G C T A G G C A T C T A G A C G T
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

TFAP2B/MA0811.1/Jaspar

Match Rank:10
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CCACCGGGTR
TGCCCTNGGGCA
 A C G T A C G T A G T C A G T C C G T A A T G C G A T C A T C G A C T G C T A G G C A T C T A G
G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A