Information for 1-GGGCTTCCAC (Motif 5)

C T A G T C A G A C T G G A T C G A C T A G C T A T G C G T A C T G C A T A G C
Reverse Opposite:
A T C G A C G T C A T G T A C G T C G A C T G A C T A G T G A C A G T C A G T C
p-value:1e-10
log p-value:-2.355e+01
Information Content per bp:1.654
Number of Target Sequences with motif122.0
Percentage of Target Sequences with motif15.08%
Number of Background Sequences with motif3913.4
Percentage of Background Sequences with motif8.18%
Average Position of motif in Targets50.4 +/- 26.1bp
Average Position of motif in Background49.5 +/- 34.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GGGCTTCCAC-
GGGGATTCCCCC
 A C G T C T A G T C A G A C T G G A T C G A C T A G C T A T G C G T A C T G C A T A G C A C G T
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GGGCTTCCAC
--GCTTCC--
 C T A G T C A G A C T G G A T C G A C T A G C T A T G C G T A C T G C A T A G C
A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GGGCTTCCAC-
AGGGGATTCCCCT
 A C G T A C G T C T A G T C A G A C T G G A T C G A C T A G C T A T G C G T A C T G C A T A G C A C G T
T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T

NFKB1/MA0105.4/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GGGCTTCCAC-
AGGGGATTCCCCT
 A C G T A C G T C T A G T C A G A C T G G A T C G A C T A G C T A T G C G T A C T G C A T A G C A C G T
T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:5
Score:0.65
Offset:4
Orientation:forward strand
Alignment:GGGCTTCCAC
----ATCCAC
 C T A G T C A G A C T G G A T C G A C T A G C T A T G C G T A C T G C A T A G C
A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C

REL/MA0101.1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGGCTTCCAC
GGGGATTTCC--
 A C G T A C G T C T A G T C A G A C T G G A T C G A C T A G C T A T G C G T A C T G C A T A G C
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T

SPIB/MA0081.1/Jaspar

Match Rank:7
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GGGCTTCCAC-
----TTCCTCT
 C T A G T C A G A C T G G A T C G A C T A G C T A T G C G T A C T G C A T A G C A C G T
A C G T A C G T A C G T A C G T C G A T C G A T G A T C A G T C A C G T A T G C C G A T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGGCTTCCAC--
GGGATTGCATNN
 C T A G T C A G A C T G G A T C G A C T A G C T A T G C G T A C T G C A T A G C A C G T A C G T
T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GGGCTTCCAC-
-NRYTTCCGGH
 C T A G T C A G A C T G G A T C G A C T A G C T A T G C G T A C T G C A T A G C A C G T
A C G T A G T C C T G A A G T C C G A T C A G T G A T C A T G C A C T G A T C G G A C T

PB0052.1_Plagl1_1/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GGGCTTCCAC--
NNNGGGGCGCCCCCNN
 A C G T A C G T A C G T A C G T C T A G T C A G A C T G G A T C G A C T A G C T A T G C G T A C T G C A T A G C A C G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A