Information for 2-DGCGTGTGCAGCCTCC (Motif 3)

C A G T A T C G A G T C A T C G A C G T A C T G A G C T A C T G A G T C G T C A C T A G G T A C A G T C A C G T A G T C A T G C
Reverse Opposite:
A T C G A C T G G T C A A C T G A C T G A G T C A C G T A C T G A G T C C T G A A G T C G T C A A T G C T C A G A T G C G T C A
p-value:1e-10
log p-value:-2.522e+01
Information Content per bp:1.811
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets28.2 +/- 16.5bp
Average Position of motif in Background74.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---DGCGTGTGCAGCCTCC
NNGCGTGTGTGCNGCN---
 A C G T A C G T A C G T C A G T A T C G A G T C A T C G A C G T A C T G A G C T A C T G A G T C G T C A C T A G G T A C A G T C A C G T A G T C A T G C
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T A C G T A C G T A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--DGCGTGTGCAGCCTCC
GGGCCGTGTGCAAAAA--
 A C G T A C G T C A G T A T C G A G T C A T C G A C G T A C T G A G C T A C T G A G T C G T C A C T A G G T A C A G T C A C G T A G T C A T G C
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T A C G T A C G T

MTF1/MA0863.1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--DGCGTGTGCAGCCTCC
GTGCCGTGTGCAAA----
 A C G T A C G T C A G T A T C G A G T C A T C G A C G T A C T G A G C T A C T G A G T C G T C A C T A G G T A C A G T C A C G T A G T C A T G C
C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A A C G T A C G T A C G T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:DGCGTGTGCAGCCTCC
----TGCGCAGGCGC-
 C A G T A T C G A G T C A T C G A C G T A C T G A G C T A C T G A G T C G T C A C T A G G T A C A G T C A C G T A G T C A T G C
A C G T A C G T A C G T A C G T A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:DGCGTGTGCAGCCTCC
TGCCTGCGYCMCCTT-
 C A G T A T C G A G T C A T C G A C G T A C T G A G C T A C T G A G T C G T C A C T A G G T A C A G T C A C G T A G T C A T G C
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:DGCGTGTGCAGCCTCC
TGCGTG----------
 C A G T A T C G A G T C A T C G A C G T A C T G A G C T A C T G A G T C G T C A C T A G G T A C A G T C A C G T A G T C A T G C
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---DGCGTGTGCAGCCTCC
NNNNTTGTGTGCTTNN---
 A C G T A C G T A C G T C A G T A T C G A G T C A T C G A C G T A C T G A G C T A C T G A G T C G T C A C T A G G T A C A G T C A C G T A G T C A T G C
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T A C G T A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.53
Offset:3
Orientation:forward strand
Alignment:DGCGTGTGCAGCCTCC
---CTGCGCATGCGC-
 C A G T A T C G A G T C A T C G A C G T A C T G A G C T A C T G A G T C G T C A C T A G G T A C A G T C A C G T A G T C A T G C
A C G T A C G T A C G T A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C A C G T

EGR2/MA0472.2/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:DGCGTGTGCAGCCTCC
TGCGTGGGCGT-----
 C A G T A T C G A G T C A T C G A C G T A C T G A G C T A C T G A G T C G T C A C T A G G T A C A G T C A C G T A G T C A T G C
G A C T T C A G G T A C T C A G A C G T T C A G A C T G T C A G G A T C T C A G C A G T A C G T A C G T A C G T A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-DGCGTGTGCAGCCTCC
NTNTATGTGCACATNNN
 A C G T C A G T A T C G A G T C A T C G A C G T A C T G A G C T A C T G A G T C G T C A C T A G G T A C A G T C A C G T A G T C A T G C
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A