Information for 1-GGKCCTGGCTCTGCTC (Motif 2)

A C T G A C T G C A T G A G T C A G T C A C G T A C T G A C T G A G T C A G C T A T G C A G C T A C T G A T G C A C G T A G T C
Reverse Opposite:
A C T G C G T A A T C G A G T C C T G A A T C G C T G A A C T G A G T C A G T C C G T A A C T G A C T G G T A C A G T C G T A C
p-value:1e-10
log p-value:-2.522e+01
Information Content per bp:1.871
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.4 +/- 21.3bp
Average Position of motif in Background30.2 +/- 7.5bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GGKCCTGGCTCTGCTC-
--GYCTGGYYTNTGTCA
 A C T G A C T G C A T G A G T C A G T C A C G T A C T G A C T G A G T C A G C T A T G C A G C T A C T G A T G C A C G T A G T C A C G T
A C G T A C G T A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

Klf12/MA0742.1/Jaspar

Match Rank:2
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----GGKCCTGGCTCTGCTC
NANAAGGGCGTGGTC------
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C A T G A G T C A G T C A C G T A C T G A C T G A G T C A G C T A T G C A G C T A C T G A T G C A C G T A G T C
C G T A C G T A C G A T C G T A C G T A C T A G T C A G C T A G G A T C C A T G A C G T A T C G C A T G A G C T G T A C A C G T A C G T A C G T A C G T A C G T A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:3
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GGKCCTGGCTCTGCTC
MKGGGYGTGGCC------
 A C G T A C G T A C T G A C T G C A T G A G T C A G T C A C G T A C T G A C T G A G T C A G C T A T G C A G C T A C T G A T G C A C G T A G T C
G T A C C A G T A C T G A C T G A C T G G A T C A C T G A C G T A C T G A C T G A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GGKCCTGGCTCTGCTC
AGGCCTAG--------
 A C T G A C T G C A T G A G T C A G T C A C G T A C T G A C T G A G T C A G C T A T G C A G C T A C T G A T G C A C G T A G T C
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SP4/MA0685.1/Jaspar

Match Rank:5
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----GGKCCTGGCTCTGCTC
NAAGGGGGCGTGGCTTN----
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C A T G A G T C A G T C A C G T A C T G A C T G A G T C A G C T A T G C A G C T A C T G A T G C A C G T A G T C
C T G A C T G A C G T A C T A G C A T G T C A G A C T G A T C G T G A C A C T G A C G T T C A G C A T G G A T C G A C T C G A T T C G A A C G T A C G T A C G T A C G T

KLF14/MA0740.1/Jaspar

Match Rank:6
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----GGKCCTGGCTCTGCTC
AAGGGGGCGTGGCC------
 A C G T A C G T A C G T A C G T A C T G A C T G C A T G A G T C A G T C A C G T A C T G A C T G A G T C A G C T A T G C A G C T A C T G A T G C A C G T A G T C
C T G A C T G A C T A G C A T G T C A G T C A G A T C G A G T C C A T G A C G T T C A G C A T G A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:7
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GGKCCTGGCTCTGCTC
RGTGGGYGTGGC-------
 A C G T A C G T A C G T A C T G A C T G C A T G A G T C A G T C A C G T A C T G A C T G A G T C A G C T A T G C A G C T A C T G A T G C A C G T A G T C
C T G A T C A G C A G T C T A G A T C G A C T G G A T C C A T G A C G T C A T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GGKCCTGGCTCTGCTC
-TGCCTGCGYCMCCTT
 A C T G A C T G C A T G A G T C A G T C A C G T A C T G A C T G A G T C A G C T A T G C A G C T A C T G A T G C A C G T A G T C
A C G T C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GGKCCTGGCTCTGCTC
AGGCCTNG--------
 A C T G A C T G C A T G A G T C A G T C A C G T A C T G A C T G A G T C A G C T A T G C A G C T A C T G A T G C A C G T A G T C
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GGKCCTGGCTCTGCTC---
---CTTGGCANNNTGCCAA
 A C T G A C T G C A T G A G T C A G T C A C G T A C T G A C T G A G T C A G C T A T G C A G C T A C T G A T G C A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A