Information for 10-GATCTGGGTC (Motif 19)

A C T G C G T A A C G T A G T C A C G T A C T G A C T G A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A G T A C A G T C A G T C C G T A A C T G C G T A A C G T A G T C
p-value:1e-5
log p-value:-1.337e+01
Information Content per bp:1.961
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif11.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets55.0 +/- 27.5bp
Average Position of motif in Background51.7 +/- 18.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GATCTGGGTC-
-AAYTAGGTCA
 A C T G C G T A A C G T A G T C A C G T A C T G A C T G A C T G A C G T A G T C A C G T
A C G T G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GATCTGGGTC
GGTCTGGCAT
 A C T G C G T A A C G T A G T C A C G T A C T G A C T G A C T G A C G T A G T C
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

PB0157.1_Rara_2/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GATCTGGGTC-----
AGAGCGGGGTCAAGTA
 A C G T A C T G C G T A A C G T A G T C A C G T A C T G A C T G A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

RORA(var.2)/MA0072.1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GATCTGGGTC--
TATAAGTAGGTCAA
 A C G T A C G T A C T G C G T A A C G T A G T C A C G T A C T G A C T G A C T G A C G T A G T C A C G T A C G T
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A

SPDEF/MA0686.1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GATCTGGGTC
TACATCCGGGT-
 A C G T A C G T A C T G C G T A A C G T A G T C A C G T A C T G A C T G A C T G A C G T A G T C
G A C T C T G A A G T C C G T A G A C T G T A C A G T C A C T G A T C G A C T G G C A T A C G T

RORA/MA0071.1/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GATCTGGGTC-
-ATCAAGGTCA
 A C T G C G T A A C G T A G T C A C G T A C T G A C T G A C T G A C G T A G T C A C G T
A C G T C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A

PB0153.1_Nr2f2_2/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GATCTGGGTC-----
CGCGCCGGGTCACGTA
 A C G T A C T G C G T A A C G T A G T C A C G T A C T G A C T G A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GATCTGGGTC
AACATCTGGA--
 A C G T A C G T A C T G C G T A A C G T A G T C A C G T A C T G A C T G A C T G A C G T A G T C
T G C A C T G A A T G C G T C A A C G T A T G C A C G T A C T G A C T G T G C A A C G T A C G T

ZBTB18/MA0698.1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GATCTGGGTC
NAACATCTGGATN
 A C G T A C G T A C G T A C T G C G T A A C G T A G T C A C G T A C T G A C T G A C T G A C G T A G T C
T C A G G T C A C T G A A G T C T G C A C A G T T A G C G C A T C A T G A C T G T G C A G C A T C A T G

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GATCTGGGTC-
BCNGGTTCTAGANCN
 A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A C G T A C T G A C T G A C T G A C G T A G T C A C G T
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T