Information for 25-CCGCCGCGGATTT (Motif 41)

A G T C A G T C A C T G A G T C A G T C A C T G A G T C A C T G A C T G C G T A A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A A C G T A G T C A G T C A C T G A G T C A C T G A C T G A G T C A C T G A C T G
p-value:1e-1
log p-value:-4.128e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.13%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0202.1_Zfp410_2/Jaspar

Match Rank:1
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CCGCCGCGGATTT
TCACCCCGCCCCAAATT-
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G A G T C A G T C A C T G A G T C A C T G A C T G C G T A A C G T A C G T A C G T
A G C T G A T C G T C A A G T C G A T C A G T C A G T C A C T G T G A C A G T C T G A C A T G C C G A T G C T A G T C A G A C T G C A T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:2
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CCGCCGCGGATTT-
----CNGTGATTTN
 A G T C A G T C A C T G A G T C A G T C A C T G A G T C A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

PB0110.1_Bcl6b_2/Jaspar

Match Rank:3
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CCGCCGCGGATTT
ATCCCCGCCCCTAAAA-
 A C G T A C G T A C G T A C G T A G T C A G T C A C T G A G T C A G T C A C T G A G T C A C T G A C T G C G T A A C G T A C G T A C G T
G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A A C G T

PH0015.1_Crx/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CCGCCGCGGATTT----
-CGTTGGGGATTAGCCT
 A G T C A G T C A C T G A G T C A G T C A C T G A G T C A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CCGCCGCGGATTT-
--NNTGTGGATTSS
 A G T C A G T C A C T G A G T C A G T C A C T G A G T C A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

PB0179.1_Sp100_2/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CCGCCGCGGATTT-
TCCGTCGCTTAAAAG
 A C G T A G T C A G T C A C T G A G T C A G T C A C T G A G T C A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A G C T A T G C G A T C T C A G G C A T T G A C A C T G G A T C A C G T C A G T G C T A C G T A G C T A C G T A A C T G

GSC2/MA0891.1/Jaspar

Match Rank:7
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CCGCCGCGGATTT--
-----GNGGATTAGN
 A G T C A G T C A C T G A G T C A G T C A C T G A G T C A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G

OTX1/MA0711.1/Jaspar

Match Rank:8
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CCGCCGCGGATTT-
------CGGATTAN
 A G T C A G T C A C T G A G T C A G T C A C T G A G T C A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A

HINFP/MA0131.2/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CCGCCGCGGATTT--
---NCGCGGACGTTG
 A G T C A G T C A C T G A G T C A G T C A C T G A G T C A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G

OTX2/MA0712.1/Jaspar

Match Rank:10
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:CCGCCGCGGATTT-
------NGGATTAA
 A G T C A G T C A C T G A G T C A G T C A C T G A G T C A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A