Information for 9-AACGTATTGT (Motif 34)

C G T A C G T A T A G C A C T G A C G T C G T A A G C T A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A C T G A A C G T C G T A A G T C A C T G A C G T A C G T
p-value:1e-6
log p-value:-1.417e+01
Information Content per bp:1.909
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.7 +/- 16.6bp
Average Position of motif in Background33.9 +/- 17.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0063.1_Sox13_1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AACGTATTGT------
AANTTATTGTTCTNNA
 C G T A C G T A T A G C A C T G A C G T C G T A A G C T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

PB0183.1_Sry_2/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AACGTATTGT-------
CNNNTATTGTTCNNNNN
 C G T A C G T A T A G C A C T G A C G T C G T A A G C T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

PB0173.1_Sox21_2/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AACGTATTGT-------
AATCAATTGTTCCGCTA
 C G T A C G T A T A G C A C T G A C G T C G T A A G C T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

Sox17/MA0078.1/Jaspar

Match Rank:4
Score:0.66
Offset:2
Orientation:forward strand
Alignment:AACGTATTGT-
--CTCATTGTC
 C G T A C G T A T A G C A C T G A C G T C G T A A G C T A C G T A C T G A C G T A C G T
A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C

PB0065.1_Sox15_1/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AACGTATTGT------
ANNTCTATTGTTCNNNA
 A C G T C G T A C G T A T A G C A C T G A C G T C G T A A G C T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A

PB0074.1_Sox8_1/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AACGTATTGT------
GTATCTATTGTTCTTTA
 A C G T C G T A C G T A T A G C A C T G A C G T C G T A A G C T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A

Sox5/MA0087.1/Jaspar

Match Rank:7
Score:0.65
Offset:5
Orientation:forward strand
Alignment:AACGTATTGT--
-----ATTGTTA
 C G T A C G T A T A G C A C T G A C G T C G T A A G C T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T

PB0072.1_Sox5_1/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AACGTATTGT------
NNTTTATTGTTCTNNN
 C G T A C G T A T A G C A C T G A C G T C G T A A G C T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A

MF0011.1_HMG_class/Jaspar

Match Rank:9
Score:0.65
Offset:5
Orientation:forward strand
Alignment:AACGTATTGT-
-----ATTGTT
 C G T A C G T A T A G C A C T G A C G T C G T A A G C T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T

SRY/MA0084.1/Jaspar

Match Rank:10
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:AACGTATTGT----
-----ATTGTTTAN
 C G T A C G T A T A G C A C T G A C G T C G T A A G C T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C