Information for 20-YKCCGYAGCTCCY (Motif 33)

A G T C A C T G A G T C A T G C A C T G A G C T C G T A A C T G A G T C A C G T A G T C A G T C A G C T
Reverse Opposite:
C T G A A C T G A C T G C G T A A C T G A G T C A C G T C T G A A G T C A T C G A C T G G T A C C T A G
p-value:1e-6
log p-value:-1.491e+01
Information Content per bp:1.878
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif16.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets47.6 +/- 18.4bp
Average Position of motif in Background59.9 +/- 22.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.66
Offset:3
Orientation:forward strand
Alignment:YKCCGYAGCTCCY
---CGCAGCTGCG
 A G T C A C T G A G T C A T G C A C T G A G C T C G T A A C T G A G T C A C G T A G T C A G T C A G C T
A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.66
Offset:7
Orientation:forward strand
Alignment:YKCCGYAGCTCCY
-------GCTCCG
 A G T C A C T G A G T C A T G C A C T G A G C T C G T A A C T G A G T C A C G T A G T C A G T C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

PB0003.1_Ascl2_1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:YKCCGYAGCTCCY----
CTCAGCAGCTGCTACTG
 A G T C A C T G A G T C A T G C A C T G A G C T C G T A A C T G A G T C A C G T A G T C A G T C A G C T A C G T A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

Myog/MA0500.1/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:YKCCGYAGCTCCY
--NNGCAGCTGTC
 A G T C A C T G A G T C A T G C A C T G A G C T C G T A A C T G A G T C A C G T A G T C A G T C A G C T
A C G T A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:YKCCGYAGCTCCY
-NNAGCAGCTGCT
 A G T C A C T G A G T C A T G C A C T G A G C T C G T A A C T G A G T C A C G T A G T C A G T C A G C T
A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

Ascl2/MA0816.1/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:forward strand
Alignment:YKCCGYAGCTCCY
---AGCAGCTGCT
 A G T C A C T G A G T C A T G C A C T G A G C T C G T A A C T G A G T C A C G T A G T C A G T C A G C T
A C G T A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--YKCCGYAGCTCCY
ADGGYAGYAGCATCT
 A C G T A C G T A G T C A C T G A G T C A T G C A C T G A G C T C G T A A C T G A G T C A C G T A G T C A G T C A G C T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

Tcf12/MA0521.1/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:YKCCGYAGCTCCY
--NNGCAGCTGTT
 A G T C A C T G A G T C A T G C A C T G A G C T C G T A A C T G A G T C A C G T A G T C A G T C A G C T
A C G T A C G T A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:YKCCGYAGCTCCY
---CNGTCCTCCC
 A G T C A C T G A G T C A T G C A C T G A G C T C G T A A C T G A G T C A C G T A G T C A G T C A G C T
A C G T A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:YKCCGYAGCTCCY
------NGCTN--
 A G T C A C T G A G T C A T G C A C T G A G C T C G T A A C T G A G T C A C G T A G T C A G T C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T