Information for 3-GAGKGWCCCCCCT (Motif 3)

A C T G C G T A A C T G A C T G A C T G C G A T A G T C A T G C A G T C A T G C G T A C A T G C C G A T
Reverse Opposite:
C G T A A T C G A C T G A T C G A C T G A T C G A C T G C G T A A G T C G T A C A G T C C G A T A G T C
p-value:1e-13
log p-value:-3.133e+01
Information Content per bp:1.814
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.6 +/- 30.2bp
Average Position of motif in Background65.6 +/- 4.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0025.1_Glis2_1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GAGKGWCCCCCCT---
TATCGACCCCCCACAG
 A C T G C G T A A C T G A C T G A C T G C G A T A G T C A T G C A G T C A T G C G T A C A T G C C G A T A C G T A C G T A C G T
G A C T G C T A G C A T T A G C A C T G T G C A A G T C A G T C G A T C G A T C G A T C G A T C T G C A A G T C C T G A C A T G

PB0156.1_Plagl1_2/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GAGKGWCCCCCCT--
NNNNGGTACCCCCCANN
 A C G T A C G T A C T G C G T A A C T G A C T G A C T G C G A T A G T C A T G C A G T C A T G C G T A C A T G C C G A T A C G T A C G T
G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GAGKGWCCCCCCT
GTGGGCCCCA---
 A C T G C G T A A C T G A C T G A C T G C G A T A G T C A T G C A G T C A T G C G T A C A T G C C G A T
T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A A C G T A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GAGKGWCCCCCCT--
NNNNTGACCCGGCGCG
 A C G T A C T G C G T A A C T G A C T G A C T G C G A T A G T C A T G C A G T C A T G C G T A C A T G C C G A T A C G T A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

PB0052.1_Plagl1_1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GAGKGWCCCCCCT-
TTGGGGGCGCCCCTAG
 A C G T A C G T A C T G C G T A A C T G A C T G A C T G C G A T A G T C A T G C A G T C A T G C G T A C A T G C C G A T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

PB0157.1_Rara_2/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GAGKGWCCCCCCT--
NNCNTGACCCCGCTCT
 A C G T A C T G C G T A A C T G A C T G A C T G C G A T A G T C A T G C A G T C A T G C G T A C A T G C C G A T A C G T A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GAGKGWCCCCCCT
--AAGACCCYYN-
 A C T G C G T A A C T G A C T G A C T G C G A T A G T C A T G C A G T C A T G C G T A C A T G C C G A T
A C G T A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C A C G T

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GAGKGWCCCCCCT-----
---AAGCCCCCCAAAAAT
 A C T G C G T A A C T G A C T G A C T G C G A T A G T C A T G C A G T C A T G C G T A C A T G C C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C T G A T C A G T A G C T A G C G T A C G T A C A G T C G A T C G C T A G C T A G C T A C G T A G T C A A G C T

PB0204.1_Zfp740_2/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GAGKGWCCCCCCT-----
-AAATTCCCCCCGGAAGT
 A C T G C G T A A C T G A C T G A C T G C G A T A G T C A T G C A G T C A T G C G T A C A T G C C G A T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C T G A C T G A C A G T G C A T G A T C G A T C A G T C A G T C A T G C A T G C T A C G A T C G C T G A C T G A T C A G A G C T

GLIS2/MA0736.1/Jaspar

Match Rank:10
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GAGKGWCCCCCCT-----
----GACCCCCCGCGAAG
 A C T G C G T A A C T G A C T G A C T G C G A T A G T C A T G C A G T C A T G C G T A C A T G C C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G T C G A A G T C G T A C G A T C G T A C G T A C G A T C C T A G A G T C C T A G C T G A G T C A A T C G