Information for 3-YAGTCYAGAC (Motif 6)

G A T C C T G A A C T G C G A T A G T C A G C T C T G A A C T G G T C A A G T C
Reverse Opposite:
A C T G A C G T A G T C A G C T C T G A A C T G C G T A A G T C A G C T C T A G
p-value:1e-7
log p-value:-1.801e+01
Information Content per bp:1.813
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif4.76%
Number of Background Sequences with motif191.3
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets63.5 +/- 28.7bp
Average Position of motif in Background48.5 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD3/MA0795.1/Jaspar

Match Rank:1
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:YAGTCYAGAC-
-TGTCTAGACG
 G A T C C T G A A C T G C G A T A G T C A G C T C T G A A C T G G T C A A G T C A C G T
A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-YAGTCYAGAC------
CAAATCCAGACATCACA
 A C G T G A T C C T G A A C T G C G A T A G T C A G C T C T G A A C T G G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:YAGTCYAGAC--
----CCAGACAG
 G A T C C T G A A C T G C G A T A G T C A G C T C T G A A C T G G T C A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:YAGTCYAGAC----
----CCAGACRSVB
 G A T C C T G A A C T G C G A T A G T C A G C T C T G A A C T G G T C A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:YAGTCYAGAC
TWGTCTGV--
 G A T C C T G A A C T G C G A T A G T C A G C T C T G A A C T G G T C A A G T C
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:YAGTCYAGAC-
-ATGCCAGACN
 G A T C C T G A A C T G C G A T A G T C A G C T C T G A A C T G G T C A A G T C A C G T
A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:YAGTCYAGAC-----
NGNTCTAGAACCNGV
 G A T C C T G A A C T G C G A T A G T C A G C T C T G A A C T G G T C A A G T C A C G T A C G T A C G T A C G T A C G T
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A

PB0185.1_Tcf1_2/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--YAGTCYAGAC--
NNTAATCCNGNCNN
 A C G T A C G T G A T C C T G A A C T G C G A T A G T C A G C T C T G A A C T G G T C A A G T C A C G T A C G T
G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A

PB0090.1_Zbtb12_1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-YAGTCYAGAC------
NNGATCTAGAACCTNNN
 A C G T G A T C C T G A A C T G C G A T A G T C A G C T C T G A A C T G G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G

p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer

Match Rank:10
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----YAGTCYAGAC-----
NRRRCAWGTCCDGRCATGYY
 A C G T A C G T A C G T A C G T A C G T G A T C C T G A A C T G C G A T A G T C A G C T C T G A A C T G G T C A A G T C A C G T A C G T A C G T A C G T A C G T
C G T A C T G A C T A G C T G A A G T C G C T A C G A T A T C G G A C T G A T C A G T C C T G A C T A G C T A G A G T C G C T A C G A T C T A G G A T C G A T C