Information for 1-AGACCGAGGC (Motif 4)

C G T A C T A G C T G A A T G C A G T C C T A G C G T A A C T G A C T G A G T C
Reverse Opposite:
C T A G G T A C A G T C A C G T A G T C C T A G T A C G A G C T A G T C A C G T
p-value:1e-9
log p-value:-2.072e+01
Information Content per bp:1.829
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif4.76%
Number of Background Sequences with motif143.9
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets59.1 +/- 22.4bp
Average Position of motif in Background50.5 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AGACCGAGGC-
AGCCTCAGGCA
 C G T A C T A G C T G A A T G C A G T C C T A G C G T A A C T G A C T G A G T C A C G T
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AGACCGAGGC
GAGSCCGAGC-
 A C G T C G T A C T A G C T G A A T G C A G T C C T A G C G T A A C T G A C T G A G T C
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AGACCGAGGC-
AGCCTCAGGCA
 C G T A C T A G C T G A A T G C A G T C C T A G C G T A A C T G A C T G A G T C A C G T
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A

Zfx/MA0146.2/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AGACCGAGGC---
CAGGCCNNGGCCNN
 A C G T C G T A C T A G C T G A A T G C A G T C C T A G C G T A A C T G A C T G A G T C A C G T A C G T A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

TFAP2A/MA0003.3/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGACCGAGGC-
CGCCTCAGGCA
 C G T A C T A G C T G A A T G C A G T C C T A G C G T A A C T G A C T G A G T C A C G T
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AGACCGAGGC---
ATTGCCTGAGGCAAT
 A C G T A C G T C G T A C T A G C T G A A T G C A G T C C T A G C G T A A C T G A C T G A G T C A C G T A C G T A C G T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AGACCGAGGC---
ATTGCCTCAGGCAAT
 A C G T A C G T C G T A C T A G C T G A A T G C A G T C C T A G C G T A A C T G A C T G A G T C A C G T A C G T A C G T
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AGACCGAGGC
CCAGACAG----
 A C G T A C G T C G T A C T A G C T G A A T G C A G T C C T A G C G T A A C T G A C T G A G T C
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGACCGAGGC---
-SCCTSAGGSCAW
 C G T A C T A G C T G A A T G C A G T C C T A G C G T A A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AGACCGAGGC
BCAGACWA----
 A C G T A C G T C G T A C T A G C T G A A T G C A G T C C T A G C G T A A C T G A C T G A G T C
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T