Information for 3-TAAGGTTAGACTT (Motif 8)

A C G T C T G A C G T A A C T G A C T G A C G T A G C T C G T A A C T G C G T A A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G A C G T A G T C A C G T C T G A C G T A A G T C A G T C A C G T A G C T G T C A
p-value:1e-10
log p-value:-2.413e+01
Information Content per bp:1.952
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.52%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.2 +/- 24.8bp
Average Position of motif in Background63.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TAAGGTTAGACTT
-CAGGTAAGTAT-
 A C G T C T G A C G T A A C T G A C T G A C G T A G C T C G T A A C T G C G T A A G T C A C G T A C G T
A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TAAGGTTAGACTT
TRAGGTCA-----
 A C G T C T G A C G T A A C T G A C T G A C G T A G C T C G T A A C T G C G T A A G T C A C G T A C G T
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TAAGGTTAGACTT-----
--NNATTGGACTTTNGNN
 A C G T C T G A C G T A A C T G A C T G A C G T A G C T C G T A A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

Nr2e1/MA0676.1/Jaspar

Match Rank:4
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:TAAGGTTAGACTT--
------TTGACTTTT
 A C G T C T G A C G T A A C T G A C T G A C G T A G C T C G T A A C T G C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:5
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TAAGGTTAGACTT
ANGNAAAGGTCA-----
 A C G T A C G T A C G T A C G T A C G T C T G A C G T A A C T G A C T G A C G T A G C T C G T A A C T G C G T A A G T C A C G T A C G T
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TAAGGTTAGACTT
-AAGGTCAC----
 A C G T C T G A C G T A A C T G A C T G A C G T A G C T C G T A A C T G C G T A A G T C A C G T A C G T
A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TAAGGTTAGACTT
TCAAGGTCAN----
 A C G T A C G T C T G A C G T A A C T G A C T G A C G T A G C T C G T A A C T G C G T A A G T C A C G T A C G T
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TAAGGTTAGACTT
TCAAGGTCAT----
 A C G T A C G T C T G A C G T A A C T G A C T G A C G T A G C T C G T A A C T G C G T A A G T C A C G T A C G T
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T A C G T A C G T

PB0161.1_Rxra_2/Jaspar

Match Rank:9
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----TAAGGTTAGACTT
TCGCGAAGGTTGTACT-
 A C G T A C G T A C G T A C G T A C G T C T G A C G T A A C T G A C T G A C G T A G C T C G T A A C T G C G T A A G T C A C G T A C G T
C A G T T G A C T C A G G T A C T C A G G C T A G C T A C T A G A C T G A C G T A G C T T C A G A G C T C G T A G T A C C A G T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TAAGGTTAGACTT
--AGGTGTGA---
 A C G T C T G A C G T A A C T G A C T G A C G T A G C T C G T A A C T G C G T A A G T C A C G T A C G T
A C G T A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T A C G T A C G T