Information for 3-YCYTCWSKSAKTCMCC (Motif 3)

A G C T A T G C A G T C A C G T A G T C C G T A A T G C A C T G A T G C C G T A A C T G A G C T A G T C G T A C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A C T G C T G A G T A C A C G T A T C G G T A C A T C G C G A T A C T G C G T A C T A G A T C G C T G A
p-value:1e-13
log p-value:-3.098e+01
Information Content per bp:1.811
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.90%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.6 +/- 21.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1/MA0056.1/Jaspar

Match Rank:1
Score:0.60
Offset:11
Orientation:reverse strand
Alignment:YCYTCWSKSAKTCMCC-
-----------TCCCCA
 A G C T A T G C A G T C A C G T A G T C C G T A A T G C A C T G A T G C C G T A A C T G A G C T A G T C G T A C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A

NFKB1/MA0105.4/Jaspar

Match Rank:2
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:YCYTCWSKSAKTCMCC-
----AGGGGATTCCCCT
 A G C T A T G C A G T C A C G T A G T C C G T A A T G C A C T G A T G C C G T A A C T G A G C T A G T C G T A C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:3
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:YCYTCWSKSAKTCMCC-
-----GGGGATTCCCCC
 A G C T A T G C A G T C A C G T A G T C C G T A A T G C A C T G A T G C C G T A A C T G A G C T A G T C G T A C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

FOSL2/MA0478.1/Jaspar

Match Rank:4
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:YCYTCWSKSAKTCMCC-
------NTGAGTCATCN
 A G C T A T G C A G T C A C G T A G T C C G T A A T G C A C T G A T G C C G T A A C T G A G C T A G T C G T A C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A A C G T A C T G C G T A T A C G A G C T A G T C C G T A G A C T A G T C T G A C

JUNB/MA0490.1/Jaspar

Match Rank:5
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:YCYTCWSKSAKTCMCC-
------ATGAGTCATCN
 A G C T A T G C A G T C A C G T A G T C C G T A A T G C A C T G A T G C C G T A A C T G A G C T A G T C G T A C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G C T G A T C G T A C

FOSL1/MA0477.1/Jaspar

Match Rank:6
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:YCYTCWSKSAKTCMCC
-----NATGAGTCACC
 A G C T A T G C A G T C A C G T A G T C C G T A A T G C A C T G A T G C C G T A A C T G A G C T A G T C G T A C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A T G C T G C A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C G A T C

NFKB2/MA0778.1/Jaspar

Match Rank:7
Score:0.52
Offset:4
Orientation:forward strand
Alignment:YCYTCWSKSAKTCMCC-
----AGGGGATTCCCCT
 A G C T A T G C A G T C A C G T A G T C C G T A A T G C A C T G A T G C C G T A A C T G A G C T A G T C G T A C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.51
Offset:3
Orientation:forward strand
Alignment:YCYTCWSKSAKTCMCC
---NCTGTCAATCAN-
 A G C T A T G C A G T C A C G T A G T C C G T A A T G C A C T G A T G C C G T A A C T G A G C T A G T C G T A C A G T C A G T C
A C G T A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:9
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:YCYTCWSKSAKTCMCC-
-----GGGAAATCCCCN
 A G C T A T G C A G T C A C G T A G T C C G T A A T G C A C T G A T G C C G T A A C T G A G C T A G T C G T A C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

FOS::JUN/MA0099.2/Jaspar

Match Rank:10
Score:0.49
Offset:7
Orientation:reverse strand
Alignment:YCYTCWSKSAKTCMCC
-------TGAGTCA--
 A G C T A T G C A G T C A C G T A G T C C G T A A T G C A C T G A T G C C G T A A C T G A G C T A G T C G T A C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A A C G T A C G T