Information for 9-CATCACAAGRCAG (Motif 13)

A G T C C T G A A C G T G A T C G T C A T A G C C G T A C T G A A T C G T C G A A T G C C G T A A C T G
Reverse Opposite:
A G T C C G A T A T C G A G C T A T G C G A C T G A C T A C T G C A G T C T A G T G C A G A C T A C T G
p-value:1e-8
log p-value:-1.925e+01
Information Content per bp:1.694
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif2.66%
Number of Background Sequences with motif42.8
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets50.3 +/- 26.7bp
Average Position of motif in Background52.0 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:CATCACAAGRCAG-
--------CACAGN
 A G T C C T G A A C G T G A T C G T C A T A G C C G T A C T G A A T C G T C G A A T G C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:2
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CATCACAAGRCAG
-GTCACATGAY--
 A G T C C T G A A C G T G A T C G T C A T A G C C G T A C T G A A T C G T C G A A T G C C G T A A C T G
A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CATCACAAGRCAG
TCACCTCTGGGCAG
 A C G T A G T C C T G A A C G T G A T C G T C A T A G C C G T A C T G A A T C G T C G A A T G C C G T A A C T G
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:4
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CATCACAAGRCAG
GGTCANYTGAGGWCA-
 A C G T A C G T A C G T A G T C C T G A A C G T G A T C G T C A T A G C C G T A C T G A A T C G T C G A A T G C C G T A A C T G
C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A A C G T

TFEC/MA0871.1/Jaspar

Match Rank:5
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CATCACAAGRCAG
-ATCACGTGAC--
 A G T C C T G A A C G T G A T C G T C A T A G C C G T A C T G A A T C G T C G A A T G C C G T A A C T G
A C G T T C G A C A G T G T A C C G T A A G T C T C A G G A C T A C T G T C G A A G T C A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CATCACAAGRCAG---
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A G T C C T G A A C G T G A T C G T C A T A G C C G T A C T G A A T C G T C G A A T G C C G T A A C T G A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CATCACAAGRCAG
ACATGCCCGGGCAT
 A C G T A G T C C T G A A C G T G A T C G T C A T A G C C G T A C T G A A T C G T C G A A T G C C G T A A C T G
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

MEIS2/MA0774.1/Jaspar

Match Rank:8
Score:0.52
Offset:6
Orientation:forward strand
Alignment:CATCACAAGRCAG-
------TTGACAGC
 A G T C C T G A A C G T G A T C G T C A T A G C C G T A C T G A A T C G T C G A A T G C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CATCACAAGRCAG-
--TCCCNNGGGACN
 A G T C C T G A A C G T G A T C G T C A T A G C C G T A C T G A A T C G T C G A A T G C C G T A A C T G A C G T
A C G T A C G T G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C

PB0098.1_Zfp410_1/Jaspar

Match Rank:10
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----CATCACAAGRCAG
NNNTCCATCCCATAANN-
 A C G T A C G T A C G T A C G T A C G T A G T C C T G A A C G T G A T C G T C A T A G C C G T A C T G A A T C G T C G A A T G C C G T A A C T G
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A A C G T