Information for 7-GATTGGCTGG (Motif 6)

C A T G C T G A C A G T C A G T A T C G A T C G T A G C G C A T A T C G C T A G
Reverse Opposite:
G A T C T A G C C G T A A T C G T A G C T A G C G T C A G T C A G A C T G T A C
p-value:1e-13
log p-value:-3.153e+01
Information Content per bp:1.652
Number of Target Sequences with motif53.0
Percentage of Target Sequences with motif6.16%
Number of Background Sequences with motif814.5
Percentage of Background Sequences with motif1.78%
Average Position of motif in Targets51.2 +/- 27.9bp
Average Position of motif in Background48.0 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL004.1_CCAAT-box/Jaspar

Match Rank:1
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-GATTGGCTGG-
TGATTGGCTANN
 A C G T C A T G C T G A C A G T C A G T A T C G A T C G T A G C G C A T A T C G C T A G A C G T
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFY(CCAAT)/Promoter/Homer

Match Rank:2
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--GATTGGCTGG
CCGATTGGCT--
 A C G T A C G T C A T G C T G A C A G T C A G T A T C G A T C G T A G C G C A T A T C G C T A G
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:3
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--GATTGGCTGG---
CTGATTGGTCNATTT
 A C G T A C G T C A T G C T G A C A G T C A G T A T C G A T C G T A G C G C A T A T C G C T A G A C G T A C G T A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.71
Offset:2
Orientation:forward strand
Alignment:GATTGGCTGG
--TTGGCA--
 C A T G C T G A C A G T C A G T A T C G A T C G T A G C G C A T A T C G C T A G
A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

PH0026.1_Duxbl/Jaspar

Match Rank:5
Score:0.68
Offset:-7
Orientation:reverse strand
Alignment:-------GATTGGCTGG
NNNNGTTGATTGGGTCG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T G A C A G T C A G T A T C G A T C G T A G C G C A T A T C G C T A G
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GATTGGCTGG
-NTTGGCANN
 C A T G C T G A C A G T C A G T A T C G A T C G T A G C G C A T A T C G C T A G
A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFYA/MA0060.2/Jaspar

Match Rank:7
Score:0.68
Offset:-8
Orientation:forward strand
Alignment:--------GATTGGCTGG
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T G A C A G T C A G T A T C G A T C G T A G C G C A T A T C G C T A G
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GATTGGCTGG
--TWGTCTGV
 C A T G C T G A C A G T C A G T A T C G A T C G T A G C G C A T A T C G C T A G
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

PB0164.1_Smad3_2/Jaspar

Match Rank:9
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GATTGGCTGG-----
NAGANTGGCGGGGNGNA
 A C G T A C G T C A T G C T G A C A G T C A G T A T C G A T C G T A G C G C A T A T C G C T A G A C G T A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

Dux/MA0611.1/Jaspar

Match Rank:10
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GATTGGCTGG
TTGATTGN----
 A C G T A C G T C A T G C T G A C A G T C A G T A T C G A T C G T A G C G C A T A T C G C T A G
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T A C G T