Information for 24-AGTCCGGTGTCTG (Motif 26)

C G T A A C T G A C G T A G T C A G T C A C T G A C T G A C G T A C T G A C G T A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G C G T A A G T C C G T A A G T C A G T C A C T G A C T G C G T A A G T C A C G T
p-value:1e-5
log p-value:-1.166e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.35%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.0 +/- 27.9bp
Average Position of motif in Background57.2 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.63
Offset:4
Orientation:forward strand
Alignment:AGTCCGGTGTCTG-
----VBSYGTCTGG
 C G T A A C T G A C G T A G T C A G T C A C T G A C T G A C G T A C T G A C G T A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AGTCCGGTGTCTG------
--NNTNNTGTCTGGNNTNG
 C G T A A C T G A C G T A G T C A G T C A C T G A C T G A C G T A C T G A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.61
Offset:6
Orientation:forward strand
Alignment:AGTCCGGTGTCTG-
------CTGTCTGG
 C G T A A C T G A C G T A G T C A G T C A C T G A C T G A C G T A C T G A C G T A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.59
Offset:6
Orientation:forward strand
Alignment:AGTCCGGTGTCTG-
------TWGTCTGV
 C G T A A C T G A C G T A G T C A G T C A C T G A C T G A C G T A C T G A C G T A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

PB0166.1_Sox12_2/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGTCCGGTGTCTG---
ANTCCTTTGTCTNNNN
 C G T A A C T G A C G T A G T C A G T C A C T G A C T G A C G T A C T G A C G T A G T C A C G T A C T G A C G T A C G T A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGTCCGGTGTCTG---
-GTCWGCTGTYYCTCT
 C G T A A C T G A C G T A G T C A G T C A C T G A C T G A C G T A C T G A C G T A G T C A C G T A C T G A C G T A C G T A C G T
A C G T C T A G A C G T A G T C C G T A A C T G A G T C G C A T A C T G G C A T A G T C G A C T G A T C G C A T A G T C A G C T

ID4/MA0824.1/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AGTCCGGTGTCTG
-GACAGGTGTN--
 C G T A A C T G A C G T A G T C A G T C A C T G A C T G A C G T A C T G A C G T A G T C A C G T A C T G
A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T A C G T

PB0020.1_Gabpa_1/Jaspar

Match Rank:8
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----AGTCCGGTGTCTG
NNNNACTTCCGGTATNN-
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A G T C A G T C A C T G A C T G A C G T A C T G A C G T A G T C A C G T A C T G
A C G T C G A T C T G A G T A C C T G A A G T C C G A T C G A T A G T C A G T C A C T G A T C G G A C T C G T A C G A T A C G T C A T G A C G T

FLI1/MA0475.2/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--AGTCCGGTGTCTG
CACTTCCGGT-----
 A C G T A C G T C G T A A C T G A C G T A G T C A G T C A C T G A C T G A C G T A C T G A C G T A G T C A C G T A C T G
A G T C T C G A A G T C C G A T A C G T G T A C G A T C A C T G A C T G G A C T A C G T A C G T A C G T A C G T A C G T

ETV1/MA0761.1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--AGTCCGGTGTCTG
NACTTCCGGT-----
 A C G T A C G T C G T A A C T G A C G T A G T C A G T C A C T G A C T G A C G T A C T G A C G T A G T C A C G T A C T G
G A C T T C G A A G T C C G A T C G A T G T A C A G T C A C T G A T C G G A C T A C G T A C G T A C G T A C G T A C G T