Information for 11-GGRTGRTYCWCAG (Motif 15)

A C T G A C T G C T G A A C G T A C T G C T A G A C G T A G C T A G T C C G T A A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G C G A T A C T G C T G A G T C A A G T C A G T C C G T A A G C T A G T C A G T C
p-value:1e-10
log p-value:-2.468e+01
Information Content per bp:1.879
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.8 +/- 27.0bp
Average Position of motif in Background38.7 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GGRTGRTYCWCAG
CGTGGGTGGTCC----
 A C G T A C G T A C G T A C T G A C T G C T G A A C G T A C T G C T A G A C G T A G C T A G T C C G T A A G T C C G T A A C T G
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GGRTGRTYCWCAG-
--NTGATTGACAGN
 A C T G A C T G C T G A A C G T A C T G C T A G A C G T A G C T A G T C C G T A A G T C C G T A A C T G A C G T
A C G T A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:3
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GGRTGRTYCWCAG--
---TGAGTGACAGSC
 A C T G A C T G C T G A A C G T A C T G C T A G A C G T A G C T A G T C C G T A A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:GGRTGRTYCWCAG-
--------CACAGN
 A C T G A C T G C T G A A C G T A C T G C T A G A C G T A G C T A G T C C G T A A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

PB0142.1_Jundm2_2/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GGRTGRTYCWCAG-
ATTGATGAGTCACCAA
 A C G T A C G T A C T G A C T G C T G A A C G T A C T G C T A G A C G T A G C T A G T C C G T A A G T C C G T A A C T G A C G T
T G C A C A G T A C G T C T A G T C G A A G C T A C T G G T C A A T C G G A C T T G A C C T G A A G T C G T A C C T G A G T C A

FOSL2/MA0478.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGRTGRTYCWCAG
GGATGACTCAT--
 A C T G A C T G C T G A A C G T A C T G C T A G A C G T A G C T A G T C C G T A A G T C C G T A A C T G
A C T G T C A G C T G A A C G T A C T G T C G A A T G C A C G T G T A C C G T A A C G T A C G T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GGRTGRTYCWCAG
NNANTGGTGGTCTTNNN
 A C G T A C G T A C G T A C G T A C T G A C T G C T G A A C G T A C T G C T A G A C G T A G C T A G T C C G T A A G T C C G T A A C T G
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GGRTGRTYCWCAG-
--BTGABTGACAGS
 A C T G A C T G C T G A A C G T A C T G C T A G A C G T A G C T A G T C C G T A A G T C C G T A A C T G A C G T
A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

JUND/MA0491.1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GGRTGRTYCWCAG
-NATGAGTCACN-
 A C T G A C T G C T G A A C G T A C T G C T A G A C G T A G C T A G T C C G T A A G T C C G T A A C T G
A C G T A T C G T C G A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G T C G A T C A C G T

FOS/MA0476.1/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GGRTGRTYCWCAG
-NATGAGTCANN-
 A C T G A C T G C T G A A C G T A C T G C T A G A C G T A G C T A G T C C G T A A G T C C G T A A C T G
A C G T T C G A T C G A A C G T A C T G C G T A T A C G A C G T G T A C C G T A A T G C G T C A A C G T