Information for 5-CAGAGGCGGCAGG (Motif 9)

A T G C C G T A A C T G C T G A A C T G A C T G A G T C A C T G A C T G A G T C C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C T G A G T C A G T C A C T G G T A C A G T C A G C T G T A C A C G T A T C G
p-value:1e-11
log p-value:-2.681e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.34%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.0 +/- 29.3bp
Average Position of motif in Background14.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F6/MA0471.1/Jaspar

Match Rank:1
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CAGAGGCGGCAGG-
---GGGCGGGAAGG
 A T G C C G T A A C T G C T G A A C T G A C T G A G T C A C T G A C T G A G T C C G T A A C T G A C T G A C G T
A C G T A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CAGAGGCGGCAGG--
AAGGKGRCGCAGGCA
 A T G C C G T A A C T G C T G A A C T G A C T G A G T C A C T G A C T G A G T C C G T A A C T G A C T G A C G T A C G T
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

PB0202.1_Zfp410_2/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CAGAGGCGGCAGG-
NNTNNGGGGCGGNGNGN
 A C G T A C G T A C G T A T G C C G T A A C T G C T G A A C T G A C T G A G T C A C T G A C T G A G T C C G T A A C T G A C T G A C G T
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A

E2F4/MA0470.1/Jaspar

Match Rank:4
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CAGAGGCGGCAGG-
---GGGCGGGAAGG
 A T G C C G T A A C T G C T G A A C T G A C T G A G T C A C T G A C T G A G T C C G T A A C T G A C T G A C G T
A C G T A C G T A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G

PB0110.1_Bcl6b_2/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CAGAGGCGGCAGG
NNTNAGGGGCGGNNNN
 A C G T A C G T A C G T A T G C C G T A A C T G C T G A A C T G A C T G A G T C A C T G A C T G A G T C C G T A A C T G A C T G
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:CAGAGGCGGCAGG-----
------SDGCAGGTGCNS
 A T G C C G T A A C T G C T G A A C T G A C T G A G T C A C T G A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

SP2/MA0516.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CAGAGGCGGCAGG--
GGGNGGGGGCGGGGC
 A T G C C G T A A C T G C T G A A C T G A C T G A G T C A C T G A C T G A G T C C G T A A C T G A C T G A C G T A C G T
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

PB0164.1_Smad3_2/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CAGAGGCGGCAGG--
NAGANTGGCGGGGNGNA
 A C G T A C G T A T G C C G T A A C T G C T G A A C T G A C T G A G T C A C T G A C T G A G T C C G T A A C T G A C T G A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------CAGAGGCGGCAGG-
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A A C T G C T G A A C T G A C T G A G T C A C T G A C T G A G T C C G T A A C T G A C T G A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CAGAGGCGGCAGG-
----GGCGGGAARN
 A T G C C G T A A C T G C T G A A C T G A C T G A G T C A C T G A C T G A G T C C G T A A C T G A C T G A C G T
A C G T A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G