Information for 12-AAGCGTGGAT (Motif 38)

C G T A C G T A A C T G A G T C A C T G A C G T A C T G A C T G C G T A A C G T
Reverse Opposite:
G T C A A C G T A G T C A G T C C G T A A G T C A C T G A G T C A C G T A C G T
p-value:1e-2
log p-value:-6.752e+00
Information Content per bp:1.957
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.8 +/- 32.1bp
Average Position of motif in Background65.3 +/- 19.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.74
Offset:4
Orientation:reverse strand
Alignment:AAGCGTGGAT
----GTGGAT
 C G T A C G T A A C T G A G T C A C T G A C G T A C T G A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AAGCGTGGAT
-TGCGTG---
 C G T A C G T A A C T G A G T C A C T G A C G T A C T G A C T G C G T A A C G T
A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AAGCGTGGAT
AAGCTTG---
 C G T A C G T A A C T G A G T C A C T G A C G T A C T G A C T G C G T A A C G T
C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T

Pax6/MA0069.1/Jaspar

Match Rank:4
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----AAGCGTGGAT
AANTCATGCGTGAA-
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A G T C A C T G A C G T A C T G A C T G C G T A A C G T
G T C A T C G A A G T C G A C T A T G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A T C G A A C G T

Hes1/MA1099.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AAGCGTGGAT
NNCGCGTGNN-
 A C G T C G T A C G T A A C T G A G T C A C T G A C G T A C T G A C T G C G T A A C G T
C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AAGCGTGGAT---
-NNTGTGGATTSS
 C G T A C G T A A C T G A G T C A C T G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

PB0180.1_Sp4_2/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AAGCGTGGAT--
CAAAGGCGTGGCCAG
 A C G T A C G T A C G T C G T A C G T A A C T G A G T C A C T G A C G T A C T G A C T G C G T A A C G T A C G T A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

FOXH1/MA0479.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AAGCGTGGAT----
---TGTGGATTNNN
 C G T A C G T A A C T G A G T C A C T G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

PB0111.1_Bhlhb2_2/Jaspar

Match Rank:9
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------AAGCGTGGAT------
TGTCATTACACGTGGAAGGCGGT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A G T C A C T G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T C T A G G A C T A T G C C T A G G A C T C A G T T G C A G T A C C T G A A G T C T C A G G A C T A C T G A C T G G T C A C T G A C T A G A T C G G T A C C T A G C T A G G C A T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AAGCGTGGAT
TTGCGTGCVA
 C G T A C G T A A C T G A G T C A C T G A C G T A C T G A C T G C G T A A C G T
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A