Information for 11-GTTCAAAATA (Motif 32)

A C T G A C G T A C G T A G T C C G T A C G T A C G T A C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G T C
p-value:1e-5
log p-value:-1.293e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets27.0 +/- 11.3bp
Average Position of motif in Background44.6 +/- 18.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GTTCAAAATA
NATTCAAAT--
 A C G T A C T G A C G T A C G T A G T C C G T A C G T A C G T A C G T A A C G T C G T A
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GTTCAAAATA--
GCTAAAAATAGC
 A C T G A C G T A C G T A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

MEF2C/MA0497.1/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GTTCAAAATA---
ATGCTAAAAATAGAA
 A C G T A C G T A C T G A C G T A C G T A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GTTCAAAATA--
DCYAAAAATAGM
 A C T G A C G T A C G T A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:5
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GTTCAAAATA
CGGTTTCAAA---
 A C G T A C G T A C G T A C T G A C G T A C G T A G T C C G T A C G T A C G T A C G T A A C G T C G T A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GTTCAAAATA-
-CCAAAAATAG
 A C T G A C G T A C G T A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T
A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G

PB0083.1_Tcf7_1/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GTTCAAAATA---
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

PB0082.1_Tcf3_1/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GTTCAAAATA---
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

MEF2A/MA0052.3/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GTTCAAAATA--
TCTAAAAATAGA
 A C T G A C G T A C G T A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T
C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GTTCAAAATA--
KCCAAAAATAGC
 A C T G A C G T A C G T A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C