Information for 10-GCATGCATGC (Motif 31)

C T A G T A G C T G C A C G A T A C T G A T G C T G C A C A G T C T A G A T G C
Reverse Opposite:
A T C G G A T C G T C A A C G T A T C G A G T C G C T A A C G T A T C G A G T C
p-value:1e-5
log p-value:-1.326e+01
Information Content per bp:1.712
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif7.53%
Number of Background Sequences with motif821.2
Percentage of Background Sequences with motif2.72%
Average Position of motif in Targets50.8 +/- 27.9bp
Average Position of motif in Background51.0 +/- 34.0bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GCATGCATGC
TBGCACGCAA--
 A C G T A C G T C T A G T A G C T G C A C G A T A C T G A T G C T G C A C A G T C T A G A T G C
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCATGCATGC
-CACGCA---
 C T A G T A G C T G C A C G A T A C T G A T G C T G C A C A G T C T A G A T G C
A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCATGCATGC-----
SCAGYCADGCATGAC
 C T A G T A G C T G C A C G A T A C T G A T G C T G C A C A G T C T A G A T G C A C G T A C G T A C G T A C G T A C G T
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

NRF(NRF)/Promoter/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCATGCATGC
GCGCATGCGCAC
 A C G T A C G T C T A G T A G C T G C A C G A T A C T G A T G C T G C A C A G T C T A G A T G C
A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C

PB0170.1_Sox17_2/Jaspar

Match Rank:5
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GCATGCATGC---
GACCACATTCATACAAT
 A C G T A C G T A C G T A C G T C T A G T A G C T G C A C G A T A C T G A T G C T G C A C A G T C T A G A T G C A C G T A C G T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

PB0178.1_Sox8_2/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GCATGCATGC
NNTNTCATGAATGT
 A C G T A C G T A C G T A C G T C T A G T A G C T G C A C G A T A C T G A T G C T G C A C A G T C T A G A T G C
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GCATGCATGC
RCATTCCWGG
 C T A G T A G C T G C A C G A T A C T G A T G C T G C A C A G T C T A G A T G C
C T G A T G A C C T G A A C G T C G A T A G T C A G T C G C T A C T A G T A C G

PH0148.1_Pou3f3/Jaspar

Match Rank:8
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GCATGCATGC---
TNNATTATGCATANNTT
 A C G T A C G T A C G T A C G T C T A G T A G C T G C A C G A T A C T G A T G C T G C A C A G T C T A G A T G C A C G T A C G T A C G T
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GCATGCATGC--
-AAGGCAAGTGT
 C T A G T A G C T G C A C G A T A C T G A T G C T G C A C A G T C T A G A T G C A C G T A C G T
A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

Nr2e3/MA0164.1/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GCATGCATGC
--AAGCTTG-
 C T A G T A G C T G C A C G A T A C T G A T G C T G C A C A G T C T A G A T G C
A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T