Information for 9-GGRACATTCTMCCTGA (Motif 21)

A C T G A C T G C T G A T G C A G A T C T G C A A G C T A C G T G A T C G A C T T G C A G T A C G T A C A C G T C T A G C T G A
Reverse Opposite:
G A C T A G T C G T C A A C T G A C T G A C G T C T G A C T A G G T C A C T G A A C G T C T A G A C G T G A C T A G T C G T A C
p-value:1e-9
log p-value:-2.080e+01
Information Content per bp:1.737
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.0 +/- 27.9bp
Average Position of motif in Background52.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TEAD4/MA0809.1/Jaspar

Match Rank:1
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GGRACATTCTMCCTGA
--CACATTCCAT----
 A C T G A C T G C T G A T G C A G A T C T G C A A G C T A C G T G A T C G A C T T G C A G T A C G T A C A C G T C T A G C T G A
A C G T A C G T G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---GGRACATTCTMCCTGA
CCAGGAACAG---------
 A C G T A C G T A C G T A C T G A C T G C T G A T G C A G A T C T G C A A G C T A C G T G A T C G A C T T G C A G T A C G T A C A C G T C T A G C T G A
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.50
Offset:1
Orientation:forward strand
Alignment:GGRACATTCTMCCTGA
-GGAAATTCCC-----
 A C T G A C T G C T G A T G C A G A T C T G C A A G C T A C G T G A T C G A C T T G C A G T A C G T A C A C G T C T A G C T G A
A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T A C G T A C G T A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:4
Score:0.49
Offset:2
Orientation:forward strand
Alignment:GGRACATTCTMCCTGA
--CACATTCCAT----
 A C T G A C T G C T G A T G C A G A T C T G C A A G C T A C G T G A T C G A C T T G C A G T A C G T A C A C G T C T A G C T G A
A C G T A C G T G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T A C G T A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:5
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:GGRACATTCTMCCTGA
------RYHYACCTGB
 A C T G A C T G C T G A T G C A G A T C T G C A A G C T A C G T G A T C G A C T T G C A G T A C G T A C A C G T C T A G C T G A
A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:6
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--GGRACATTCTMCCTGA
ATTGGACTTTGACCCC--
 A C G T A C G T A C T G A C T G C T G A T G C A G A T C T G C A A G C T A C G T G A T C G A C T T G C A G T A C G T A C A C G T C T A G C T G A
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C A C G T A C G T

TEAD3/MA0808.1/Jaspar

Match Rank:7
Score:0.48
Offset:3
Orientation:forward strand
Alignment:GGRACATTCTMCCTGA
---ACATTCCA-----
 A C T G A C T G C T G A T G C A G A T C T G C A A G C T A C G T G A T C G A C T T G C A G T A C G T A C A C G T C T A G C T G A
A C G T A C G T A C G T C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.47
Offset:7
Orientation:forward strand
Alignment:GGRACATTCTMCCTGA-
-------NNCACCTGNN
 A C T G A C T G C T G A T G C A G A T C T G C A A G C T A C G T G A T C G A C T T G C A G T A C G T A C A C G T C T A G C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:9
Score:0.47
Offset:-1
Orientation:forward strand
Alignment:-GGRACATTCTMCCTGA
NGGGGATTTCCC-----
 A C G T A C T G A C T G C T G A T G C A G A T C T G C A A G C T A C G T G A T C G A C T T G C A G T A C G T A C A C G T C T A G C T G A
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T A C G T A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:10
Score:0.47
Offset:-2
Orientation:reverse strand
Alignment:--GGRACATTCTMCCTGA
NNGCACCTTTCTCC----
 A C G T A C G T A C T G A C T G C T G A T G C A G A T C T G C A A G C T A C G T G A T C G A C T T G C A G T A C G T A C A C G T C T A G C T G A
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C A C G T A C G T A C G T A C G T