Information for 11-GACAAACTCATGC (Motif 20)

A C T G C G T A A G T C G T C A C G T A C T G A A G T C C G A T A G T C C G T A A C G T A C T G A G T C
Reverse Opposite:
C T A G A G T C C G T A A C G T A C T G C G T A A C T G A G C T A C G T A C G T A C T G A C G T A G T C
p-value:1e-9
log p-value:-2.080e+01
Information Content per bp:1.935
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.5 +/- 27.7bp
Average Position of motif in Background28.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myc/MA0147.2/Jaspar

Match Rank:1
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GACAAACTCATGC
---AAGCACATGG
 A C T G C G T A A G T C G T C A C G T A C T G A A G T C C G A T A G T C C G T A A C G T A C T G A G T C
A C G T A C G T A C G T T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G

PB0166.1_Sox12_2/Jaspar

Match Rank:2
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----GACAAACTCATGC
AAACAGACAAAGGAAT--
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C G T C A C G T A C T G A A G T C C G A T A G T C C G T A A C G T A C T G A G T C
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T

BHLHE23/MA0817.1/Jaspar

Match Rank:3
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GACAAACTCATGC--
---AAACATATGTTT
 A C T G C G T A A G T C G T C A C G T A C T G A A G T C C G A T A G T C C G T A A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T C G T A T C G A T G C A G T A C C T G A A G C T T G C A G A C T A C T G A C G T G A C T C G A T

Pax6/MA0069.1/Jaspar

Match Rank:4
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GACAAACTCATGC-----
----AANTCATGCGTGAA
 A C T G C G T A A G T C G T C A C G T A C T G A A G T C C G A T A G T C C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A T C G A A G T C G A C T A T G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A T C G A

CLOCK/MA0819.1/Jaspar

Match Rank:5
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GACAAACTCATGC-
----AACACGTGTT
 A C T G C G T A A G T C G T C A C G T A C T G A A G T C C G A T A G T C C G T A A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T C T G A T C G A G T A C T C G A G A T C C T A G A C G T A C T G A G C T G A C T

MEIS1/MA0498.2/Jaspar

Match Rank:6
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GACAAACTCATGC
TTGACAG--------
 A C G T A C G T A C T G C G T A A G T C G T C A C G T A C T G A A G T C C G A T A G T C C G T A A C G T A C T G A G T C
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:7
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GACAAACTCATGC----
---ACATTCATGACACG
 A C T G C G T A A G T C G T C A C G T A C T G A A G T C C G A T A G T C C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GACAAACTCATGC
GCCACACCCA---
 A C T G C G T A A G T C G T C A C G T A C T G A A G T C C G A T A G T C C G T A A C G T A C T G A G T C
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T

PB0032.1_IRC900814_1/Jaspar

Match Rank:9
Score:0.51
Offset:-6
Orientation:forward strand
Alignment:------GACAAACTCATGC
ATTTACGACAAATAGC---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C G T C A C G T A C T G A A G T C C G A T A G T C C G T A A C G T A C T G A G T C
C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C A C G T A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GACAAACTCATGC--
AAGGCGAAATCATCGCA
 A C G T A C G T A C T G C G T A A G T C G T C A C G T A C T G A A G T C C G A T A G T C C G T A A C G T A C T G A G T C A C G T A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A