Information for 7-TGCAKWCTGCTGY (Motif 16)

G C A T A C T G A T G C C T G A A C T G C G T A G T A C A C G T A C T G A G T C A C G T C A T G G A T C
Reverse Opposite:
C T A G G T A C G T C A A C T G A G T C C G T A A C T G G C A T G T A C A G C T A T C G A G T C C G T A
p-value:1e-9
log p-value:-2.137e+01
Information Content per bp:1.752
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif2.15%
Number of Background Sequences with motif22.6
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets59.4 +/- 24.0bp
Average Position of motif in Background50.8 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRL/MA0842.1/Jaspar

Match Rank:1
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TGCAKWCTGCTGY-
---AATTTGCTGAC
 G C A T A C T G A T G C C T G A A C T G C G T A G T A C A C G T A C T G A G T C A C G T C A T G G A T C A C G T
A C G T A C G T A C G T C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C

MAFK/MA0496.1/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TGCAKWCTGCTGY-----
---AAANTGCTGACTNAG
 G C A T A C T G A T G C C T G A A C T G C G T A G T A C A C G T A C T G A G T C A C G T C A T G G A T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G

Mafb/MA0117.2/Jaspar

Match Rank:3
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TGCAKWCTGCTGY--
---AAAATGCTGACT
 G C A T A C T G A T G C C T G A A C T G C G T A G T A C A C G T A C T G A G T C A C G T C A T G G A T C A C G T A C G T
A C G T A C G T A C G T C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TGCAKWCTGCTGY-
--CCCCCTGCTGTG
 G C A T A C T G A T G C C T G A A C T G C G T A G T A C A C G T A C T G A G T C A C G T C A T G G A T C A C G T
A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TGCAKWCTGCTGY
WYATGCATWATGCAT-
 A C G T A C G T A C G T G C A T A C T G A T G C C T G A A C T G C G T A G T A C A C G T A C T G A G T C A C G T C A T G G A T C
C G T A A G C T C G T A A C G T A C T G G T A C C G T A A C G T C G A T C G T A A C G T A C T G A G T C C G T A C G A T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGCAKWCTGCTGY--
GGCCYCCTGCTGDGH
 G C A T A C T G A T G C C T G A A C T G C G T A G T A C A C G T A C T G A G T C A C G T C A T G G A T C A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:TGCAKWCTGCTGY
-------NGCTN-
 G C A T A C T G A T G C C T G A A C T G C G T A G T A C A C G T A C T G A G T C A C G T C A T G G A T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

POL002.1_INR/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TGCAKWCTGCTGY
--NNNANTGA---
 G C A T A C T G A T G C C T G A A C T G C G T A G T A C A C G T A C T G A G T C A C G T C A T G G A T C
A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TGCAKWCTGCTGY----
--NNTCCTGCTGTGNNN
 G C A T A C T G A T G C C T G A A C T G C G T A G T A C A C G T A C T G A G T C A C G T C A T G G A T C A C G T A C G T A C G T A C G T
A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TGCAKWCTGCTGY----
--AAAWWTGCTGACWWD
 G C A T A C T G A T G C C T G A A C T G C G T A G T A C A C G T A C T G A G T C A C G T C A T G G A T C A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G