Information for 6-YATGKGCTTRGGM (Motif 9)

A G T C G T C A A C G T A C T G A C T G A C T G A G T C A C G T A C G T C T G A A C T G A C T G G T A C
Reverse Opposite:
A C T G A G T C G T A C A G C T C G T A C G T A A C T G A G T C G T A C A G T C C G T A A C G T C T A G
p-value:1e-11
log p-value:-2.601e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.4 +/- 27.7bp
Average Position of motif in Background88.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myc/MA0147.2/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-YATGKGCTTRGGM
CCATGTGCTT----
 A C G T A G T C G T C A A C G T A C T G A C T G A C T G A G T C A C G T A C G T C T G A A C T G A C T G G T A C
T G A C A G T C C G T A A G C T A C T G A C G T A C T G A T G C G A C T A G C T A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----YATGKGCTTRGGM
NNNNTTGTGTGCTTNN--
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A A C G T A C T G A C T G A C T G A G T C A C G T A C G T C T G A A C T G A C T G G T A C
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:YATGKGCTTRGGM
-ATGCCCTGAGGC
 A G T C G T C A A C G T A C T G A C T G A C T G A G T C A C G T A C G T C T G A A C T G A C T G G T A C
A C G T G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C

Klf12/MA0742.1/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--YATGKGCTTRGGM
NANAAGGGCGTGGTC
 A C G T A C G T A G T C G T C A A C G T A C T G A C T G A C T G A G T C A C G T A C G T C T G A A C T G A C T G G T A C
C G T A C G T A C G A T C G T A C G T A C T A G T C A G C T A G G A T C C A T G A C G T A T C G C A T G A G C T G T A C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:YATGKGCTTRGGM
--TGACCTTGAN-
 A G T C G T C A A C G T A C T G A C T G A C T G A G T C A C G T A C G T C T G A A C T G A C T G G T A C
A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:YATGKGCTTRGGM
BNTGDCCTTG---
 A G T C G T C A A C G T A C T G A C T G A C T G A G T C A C G T A C G T C T G A A C T G A C T G G T A C
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:YATGKGCTTRGGM-----
--TGGACTTTGNNCTNTG
 A G T C G T C A A C G T A C T G A C T G A C T G A G T C A C G T A C G T C T G A A C T G A C T G G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:YATGKGCTTRGGM
-CTGTGGTTTN--
 A G T C G T C A A C G T A C T G A C T G A C T G A G T C A C G T A C G T C T G A A C T G A C T G G T A C
A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T

EGR2/MA0472.2/Jaspar

Match Rank:9
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:YATGKGCTTRGGM--
----TGCGTGGGCGT
 A G T C G T C A A C G T A C T G A C T G A C T G A G T C A C G T A C G T C T G A A C T G A C T G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T G A C T T C A G G T A C T C A G A C G T T C A G A C T G T C A G G A T C T C A G C A G T

HNF4G/MA0484.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:YATGKGCTTRGGM----
--TGGACTTTGNNCTCN
 A G T C G T C A A C G T A C T G A C T G A C T G A G T C A C G T A C G T C T G A A C T G A C T G G T A C A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T