Information for 2-TAACAAGTTG (Motif 6)

A C G T C G T A C G T A A T G C G C T A C G T A A C T G A G C T A G C T T C A G
Reverse Opposite:
A G T C T C G A C T G A A G T C A C G T C G A T A T C G A C G T A C G T G T C A
p-value:1e-12
log p-value:-2.861e+01
Information Content per bp:1.848
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.86%
Number of Background Sequences with motif46.3
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets55.0 +/- 27.0bp
Average Position of motif in Background52.5 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0040.1_Hmbox1/Jaspar

Match Rank:1
Score:0.73
Offset:-5
Orientation:reverse strand
Alignment:-----TAACAAGTTG--
GANGTTAACTAGTTTNN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A T G C G C T A C G T A A C T G A G C T A G C T T C A G A C G T A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

HMBOX1/MA0895.1/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TAACAAGTTG
GTTAACTAGN--
 A C G T A C G T A C G T C G T A C G T A A T G C G C T A C G T A A C T G A G C T A G C T T C A G
A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T A C G T

LBX1/MA0618.1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TAACAAGTTG
TTAATTAG---
 A C G T A C G T C G T A C G T A A T G C G C T A C G T A A C T G A G C T A G C T T C A G
C G A T A G C T C G T A C G T A A G C T C G A T C T G A A T C G A C G T A C G T A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:4
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------TAACAAGTTG-
AGCTGTTAACTAGCCGT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A T G C G C T A C G T A A C T G A G C T A G C T T C A G A C G T
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T

PB0119.1_Foxa2_2/Jaspar

Match Rank:5
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TAACAAGTTG
AAAAATAACAAACGG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A T G C G C T A C G T A A C T G A G C T A G C T T C A G
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

PB0165.1_Sox11_2/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TAACAAGTTG
NNCNNAACAATTNT
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A T G C G C T A C G T A A C T G A G C T A G C T T C A G
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T

PB0175.1_Sox4_2/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TAACAAGTTG---
TNCNNAACAATTTTTNC
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A T G C G C T A C G T A A C T G A G C T A G C T T C A G A C G T A C G T A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

SRY/MA0084.1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TAACAAGTTG
GTAAACAAT---
 A C G T A C G T A C G T C G T A C G T A A T G C G C T A C G T A A C T G A G C T A G C T T C A G
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TAACAAGTTG
-AACAAT---
 A C G T C G T A C G T A A T G C G C T A C G T A A C T G A G C T A G C T T C A G
A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TAACAAGTTG
NAACAAT---
 A C G T C G T A C G T A A T G C G C T A C G T A A C T G A G C T A G C T T C A G
G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T