Information for 6-GCTCCTTGGCCAG (Motif 9)

A C T G A G T C C A G T A G T C G T A C A C G T A C G T A C T G A C T G A G T C A G T C C G T A A T C G
Reverse Opposite:
A T G C C G A T A C T G A C T G A G T C A G T C C G T A G T C A C A T G C T A G G C T A A C T G A G T C
p-value:1e-11
log p-value:-2.670e+01
Information Content per bp:1.859
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.4 +/- 25.5bp
Average Position of motif in Background28.8 +/- 17.2bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GCTCCTTGGCCAG
-CCGATTGGCT--
 A C T G A G T C C A G T A G T C G T A C A C G T A C G T A C T G A C T G A G T C A G T C C G T A A T C G
A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T

REST/MA0138.2/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GCTCCTTGGCCAG----
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A C G T A C G T A C T G A G T C C A G T A G T C G T A C A C G T A C G T A C T G A C T G A G T C A G T C C G T A A T C G A C G T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GCTCCTTGGCCAG----
TCAGCACCATGGACAGCTCC
 A C G T A C G T A C G T A C T G A G T C C A G T A G T C G T A C A C G T A C G T A C T G A C T G A G T C A G T C C G T A A T C G A C G T A C G T A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

Zfx/MA0146.2/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCTCCTTGGCCAG
GGGGCCGAGGCCTG
 A C G T A C T G A G T C C A G T A G T C G T A C A C G T A C G T A C T G A C T G A G T C A G T C C G T A A T C G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GCTCCTTGGCCAG
-----TTGGCA--
 A C T G A G T C C A G T A G T C G T A C A C G T A C G T A C T G A C T G A G T C A G T C C G T A A T C G
A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GCTCCTTGGCCAG-
--TGATTGGCTANN
 A C T G A G T C C A G T A G T C G T A C A C G T A C G T A C T G A C T G A G T C A G T C C G T A A T C G A C G T
A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GCTCCTTGGCCAG
----NTTGGCANN
 A C T G A G T C C A G T A G T C G T A C A C G T A C G T A C T G A C T G A G T C A G T C C G T A A T C G
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:GCTCCTTGGCCAG---
------TGCCCAGNHW
 A C T G A G T C C A G T A G T C G T A C A C G T A C G T A C T G A C T G A G T C A G T C C G T A A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:9
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GCTCCTTGGCCAG
----CTAGGCCT-
 A C T G A G T C C A G T A G T C G T A C A C G T A C G T A C T G A C T G A G T C A G T C C G T A A T C G
A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCTCCTTGGCCAG---
-CTGATTGGTCNATTT
 A C T G A G T C C A G T A G T C G T A C A C G T A C G T A C T G A C T G A G T C A G T C C G T A A T C G A C G T A C G T A C G T
A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T