Information for 8-TGGATGGCTA (Motif 17)

C A G T A C T G C A T G C T G A A G C T C T A G C T A G T G A C A G C T T G C A
Reverse Opposite:
A C G T C T G A A C T G A G T C A G T C T C G A A G C T G A T C T G A C G T C A
p-value:1e-5
log p-value:-1.248e+01
Information Content per bp:1.759
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.67%
Number of Background Sequences with motif182.4
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets44.9 +/- 25.3bp
Average Position of motif in Background49.7 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TGGATGGCTA
GTTAATGGCC-
 A C G T C A G T A C T G C A T G C T G A A G C T C T A G C T A G T G A C A G C T T G C A
A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C A C G T

PB0098.1_Zfp410_1/Jaspar

Match Rank:2
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------TGGATGGCTA-
TATTATGGGATGGATAA
 A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C T G C A T G C T G A A G C T C T A G C T A G T G A C A G C T T G C A A C G T
C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A

PB0167.1_Sox13_2/Jaspar

Match Rank:3
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----TGGATGGCTA---
GTATTGGGTGGGTAATT
 A C G T A C G T A C G T A C G T C A G T A C T G C A T G C T G A A G C T C T A G C T A G T G A C A G C T T G C A A C G T A C G T A C G T
C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

PH0134.1_Pbx1/Jaspar

Match Rank:4
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------TGGATGGCTA-
NNNNNATTGATGNGTGN
 A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C T G C A T G C T G A A G C T C T A G C T A G T G A C A G C T T G C A A C G T
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A

POL004.1_CCAAT-box/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGGATGGCTA--
TGATTGGCTANN
 C A G T A C T G C A T G C T G A A G C T C T A G C T A G T G A C A G C T T G C A A C G T A C G T
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TGGATGGCTA
ATGATKGATGRC--
 A C G T A C G T A C G T A C G T C A G T A C T G C A T G C T G A A G C T C T A G C T A G T G A C A G C T T G C A
C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C A C G T A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TGGATGGCTA
TGGGGAAGGGCM
 A C G T A C G T C A G T A C T G C A T G C T G A A G C T C T A G C T A G T G A C A G C T T G C A
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGGATGGCTA
GTGGAT-----
 A C G T C A G T A C T G C A T G C T G A A G C T C T A G C T A G T G A C A G C T T G C A
A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TGGATGGCTA
TGATTRATGGCY-
 A C G T A C G T A C G T C A G T A C T G C A T G C T G A A G C T C T A G C T A G T G A C A G C T T G C A
C G A T C T A G T C G A A G C T C G A T C T G A C G T A A G C T A C T G C T A G A T G C G A T C A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TGGATGGCTA
CGTGGGTGGTCC
 A C G T A C G T C A G T A C T G C A T G C T G A A G C T C T A G C T A G T G A C A G C T T G C A
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C