Information for 8-GCCCGGCTGCCGGGGY (Motif 12)

A C T G A T G C A T G C A G T C A C T G A T C G T A G C A C G T A T C G A G T C A G T C C T A G A T C G C A T G A T C G A G T C
Reverse Opposite:
C T A G A T G C G T A C T A G C A G T C T A C G A C T G T A G C T G C A A C T G A T G C A G T C C T A G A T C G A T C G G T A C
p-value:1e-7
log p-value:-1.831e+01
Information Content per bp:1.741
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif2.79%
Number of Background Sequences with motif327.1
Percentage of Background Sequences with motif0.70%
Average Position of motif in Targets54.6 +/- 20.6bp
Average Position of motif in Background50.1 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCCCGGCTGCCGGGGY
GGCCCCGCCCCC-----
 A C G T A C T G A T G C A T G C A G T C A C T G A T C G T A G C A C G T A T C G A G T C A G T C C T A G A T C G C A T G A T C G A G T C
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T A C G T A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GCCCGGCTGCCGGGGY
TGGCAGNCTGCCAG---
 A C G T A C T G A T G C A T G C A G T C A C T G A T C G T A G C A C G T A T C G A G T C A G T C C T A G A T C G C A T G A T C G A G T C
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:3
Score:0.50
Offset:0
Orientation:forward strand
Alignment:GCCCGGCTGCCGGGGY
GCCCCGCCCCCTCCC-
 A C T G A T G C A T G C A G T C A C T G A T C G T A G C A C G T A T C G A G T C A G T C C T A G A T C G C A T G A T C G A G T C
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:4
Score:0.50
Offset:0
Orientation:forward strand
Alignment:GCCCGGCTGCCGGGGY
GACCCCCCGCTGTG--
 A C T G A T G C A T G C A G T C A C T G A T C G T A G C A C G T A T C G A G T C A G T C C T A G A T C G C A T G A T C G A G T C
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:5
Score:0.49
Offset:0
Orientation:forward strand
Alignment:GCCCGGCTGCCGGGGY
GCCCCGCCCCC-----
 A C T G A T G C A T G C A G T C A C T G A T C G T A G C A C G T A T C G A G T C A G T C C T A G A T C G C A T G A T C G A G T C
A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T A C G T A C G T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:6
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-GCCCGGCTGCCGGGGY
TGCCCCCGGGCA-----
 A C G T A C T G A T G C A T G C A G T C A C T G A T C G T A G C A C G T A T C G A G T C A G T C C T A G A T C G C A T G A T C G A G T C
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T A C G T A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:7
Score:0.49
Offset:4
Orientation:forward strand
Alignment:GCCCGGCTGCCGGGGY---
----CCCCCCCGGGGGGGT
 A C T G A T G C A T G C A G T C A C T G A T C G T A G C A C G T A T C G A G T C A G T C C T A G A T C G C A T G A T C G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.49
Offset:0
Orientation:forward strand
Alignment:GCCCGGCTGCCGGGGY
GGCCYCCTGCTGDGH-
 A C T G A T G C A T G C A G T C A C T G A T C G T A G C A C G T A T C G A G T C A G T C C T A G A T C G C A T G A T C G A G T C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:9
Score:0.49
Offset:4
Orientation:forward strand
Alignment:GCCCGGCTGCCGGGGY---
----CCCCCCCGGGGGGGT
 A C T G A T G C A T G C A G T C A C T G A T C G T A G C A C G T A T C G A G T C A G T C C T A G A T C G C A T G A T C G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:10
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:GCCCGGCTGCCGGGGY-
----TGCCCTNAGGGCA
 A C T G A T G C A T G C A G T C A C T G A T C G T A G C A C G T A T C G A G T C A G T C C T A G A T C G C A T G A T C G A G T C A C G T
A C G T A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A