Information for 13-AACAGKATMCTGT (Motif 13)

C G T A C G T A A G T C C G T A A C T G A C G T C G T A A C G T G T C A A G T C C G A T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A A C T G A C G T C G T A A C G T G T C A A G T C C G A T A C T G A C G T C G A T
p-value:1e-3
log p-value:-8.898e+00
Information Content per bp:1.917
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.26%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets28.3 +/- 5.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AACAGKATMCTGT
ANCAGGATGT---
 C G T A C G T A A G T C C G T A A C T G A C G T C G T A A C G T G T C A A G T C C G A T A C T G A C G T
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T

SOX8/MA0868.1/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AACAGKATMCTGT---
AACAATGTGCAGTGTT
 C G T A C G T A A G T C C G T A A C T G A C G T C G T A A C G T G T C A A G T C C G A T A C T G A C G T A C G T A C G T A C G T
C G T A C G T A G T A C C T G A C G T A A C G T C T A G C G A T A C T G A G T C C G T A C A T G A C G T A C T G C G A T A G C T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.54
Offset:8
Orientation:forward strand
Alignment:AACAGKATMCTGT-
--------GCTGTG
 C G T A C G T A A G T C C G T A A C T G A C G T C G T A A C G T G T C A A G T C C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

Foxo1/MA0480.1/Jaspar

Match Rank:4
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----AACAGKATMCTGT
TGTAAACAGGA------
 A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A A C T G A C G T C G T A A C G T G T C A A G T C C G A T A C T G A C G T
C G A T C T A G C G A T G T C A C G T A C G T A A G T C C G T A T C A G T A C G G T C A A C G T A C G T A C G T A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AACAGKATMCTGT
AACAGGAAGT---
 C G T A C G T A A G T C C G T A A C T G A C G T C G T A A C G T G T C A A G T C C G A T A C T G A C G T
T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AACAGKATMCTGT
NACAGGAAAT---
 C G T A C G T A A G T C C G T A A C T G A C G T C G T A A C G T G T C A A G T C C G A T A C T G A C G T
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:7
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---AACAGKATMCTGT
GTAAACAG--------
 A C G T A C G T A C G T C G T A C G T A A G T C C G T A A C T G A C G T C G T A A C G T G T C A A G T C C G A T A C T G A C G T
C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:8
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--AACAGKATMCTGT
GWAAYHTGAKMC---
 A C G T A C G T C G T A C G T A A G T C C G T A A C T G A C G T C G T A A C G T G T C A A G T C C G A T A C T G A C G T
C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C A C G T A C G T A C G T

Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer

Match Rank:9
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---AACAGKATMCTGT-----
NTTMRCACNNNVSTGYKAANT
 A C G T A C G T A C G T C G T A C G T A A G T C C G T A A C T G A C G T C G T A A C G T G T C A A G T C C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
G C A T A G C T G A C T T G C A C T G A T A G C C T G A A T G C G A T C A G C T T G C A T C A G A T C G G A C T T A C G G A C T A C T G C T G A C T G A G C T A G C A T

PB0063.1_Sox13_1/Jaspar

Match Rank:10
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----AACAGKATMCTGT
TTAAGAACAATAAATT--
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A A C T G A C G T C G T A A C G T G T C A A G T C C G A T A C T G A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T A C G T A C G T