Information for 12-RARTTTAWTAATA (Motif 11)

C T G A C G T A T C A G A C G T A G C T A C G T C G T A C G A T A C G T C G T A C G T A C G A T C G T A
Reverse Opposite:
A C G T C G T A A C G T A C G T C G T A G C A T A C G T C G T A C T G A C G T A A G T C A C G T A G C T
p-value:1e-7
log p-value:-1.641e+01
Information Content per bp:1.887
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.3 +/- 32.4bp
Average Position of motif in Background43.7 +/- 22.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0129.1_Glis2_2/Jaspar

Match Rank:1
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:RARTTTAWTAATA--
-TCTTTANTAATANN
 C T G A C G T A T C A G A C G T A G C T A C G T C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T
A C G T A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T

Arid3b/MA0601.1/Jaspar

Match Rank:2
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:RARTTTAWTAATA-
---NTAATTAATAT
 C T G A C G T A T C A G A C G T A G C T A C G T C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T

PH0018.1_Dbx1/Jaspar

Match Rank:3
Score:0.72
Offset:0
Orientation:forward strand
Alignment:RARTTTAWTAATA----
TAATTAATTAATAATTA
 C T G A C G T A T C A G A C G T A G C T A C G T C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T A C G T A C G T
G A C T G C T A C T G A G C A T G C A T G C T A C G T A G C A T G C A T C G T A G C T A G C A T C G T A T C G A C G A T C G A T C T G A

PH0150.1_Pou4f3/Jaspar

Match Rank:4
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:RARTTTAWTAATA---
GACNTCATTAATAANN
 C T G A C G T A T C A G A C G T A G C T A C G T C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T A C G T
C T A G C T G A T G A C G A T C C A G T G T A C C G T A C G A T C G A T C G T A C T G A C G A T C G T A G T C A A G T C C G A T

PH0172.1_Tlx2/Jaspar

Match Rank:5
Score:0.70
Offset:0
Orientation:forward strand
Alignment:RARTTTAWTAATA----
TAATTAATTAATAACTA
 C T G A C G T A T C A G A C G T A G C T A C G T C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T A C G T A C G T
A C G T G C T A C T G A C G A T G A C T C G T A C G T A G A C T G A C T C T G A C G T A G C A T C G T A C T G A G A T C C G A T C G A T

PH0136.1_Phox2b/Jaspar

Match Rank:6
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--RARTTTAWTAATA--
CGGAATTAATTAATAGG
 A C G T A C G T C T G A C G T A T C A G A C G T A G C T A C G T C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T
T A G C T C A G A C T G G C T A T C G A G A C T G A C T T C G A C G T A G A C T A G C T C T G A C T G A A G C T C T G A A T C G A T C G

PH0051.1_Hoxa4/Jaspar

Match Rank:7
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-RARTTTAWTAATA---
CNAGTTAATTAATAANN
 A C G T C T G A C G T A T C A G A C G T A G C T A C G T C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T A C G T
T G A C T C G A G T C A T C A G G C A T G A C T G T C A C G T A G A C T A C G T C T G A C G T A A G C T C T G A C T G A G A C T G A T C

PH0101.1_Lmx1b/Jaspar

Match Rank:8
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-RARTTTAWTAATA---
NNAATTAATTAAAAANN
 A C G T C T G A C G T A T C A G A C G T A G C T A C G T C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T A C G T
T G A C C T G A G C T A C G T A A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G T A G C T A G C T A G A T C A G C T

PH0153.1_Prop1/Jaspar

Match Rank:9
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-RARTTTAWTAATA---
CGAATTAATTAAGAAAC
 A C G T C T G A C G T A T C A G A C G T A G C T A C G T C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T A C G T
T G A C T C A G T G C A T C G A G A C T G A C T C G T A C G T A G A C T A C G T C T G A C T G A A C T G C G T A C G T A C T G A G A T C

PH0093.1_Lhx3/Jaspar

Match Rank:10
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-RARTTTAWTAATA---
GAAATTAATTAAATAAT
 A C G T C T G A C G T A T C A G A C G T A G C T A C G T C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T A C G T
T A C G C G A T G T C A T C G A G A C T G A C T C T G A C G T A C G A T A G C T C T G A C T G A C G T A C G A T G T C A G T C A A C G T