Information for 10-TCCTCACTGAGMT (Motif 10)

A G C T G A T C A G T C A G C T G T A C C G T A A G T C C G A T A C T G C G T A A T C G G T C A A C G T
Reverse Opposite:
G T C A C A G T A T G C A C G T A G T C C G T A C T A G G C A T A C T G C T G A C T A G C T A G C T G A
p-value:1e-8
log p-value:-1.978e+01
Information Content per bp:1.740
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.56%
Number of Background Sequences with motif67.3
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets46.4 +/- 21.8bp
Average Position of motif in Background46.5 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TCCTCACTGAGMT
--CCTGCTGAGH-
 A G C T G A T C A G T C A G C T G T A C C G T A A G T C C G A T A C T G C G T A A T C G G T C A A C G T
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:2
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TCCTCACTGAGMT--
NNNTGAACTCNNTGACCTCN
 A C G T A C G T A C G T A C G T A C G T A G C T G A T C A G T C A G C T G T A C C G T A A G T C C G A T A C T G C G T A A T C G G T C A A C G T A C G T A C G T
G T A C G A T C G T C A G C A T T C A G G T C A G T C A G T A C A G C T A G T C C G T A T A C G G C A T T A C G T G C A G T A C G A T C G A C T A G T C G A C T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TCCTCACTGAGMT
GGCCYCCTGCTGDGH-
 A C G T A C G T A C G T A G C T G A T C A G T C A G C T G T A C C G T A A G T C C G A T A C T G C G T A A T C G G T C A A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:4
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TCCTCACTGAGMT
GACCCCCCGCTGTGC-
 A C G T A C G T A C G T A G C T G A T C A G T C A G C T G T A C C G T A A G T C C G A T A C T G C G T A A T C G G T C A A C G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:5
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TCCTCACTGAGMT--
TGACCCAGTGACCTAC
 A C G T A G C T G A T C A G T C A G C T G T A C C G T A A G T C C G A T A C T G C G T A A T C G G T C A A C G T A C G T A C G T
G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

PB0005.1_Bbx_1/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TCCTCACTGAGMT-
NANTTCATTGAATTA
 A C G T A G C T G A T C A G T C A G C T G T A C C G T A A G T C C G A T A C T G C G T A A T C G G T C A A C G T A C G T
G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A

LEF1/MA0768.1/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TCCTCACTGAGMT--
AACCCTTTGATCTTT
 A G C T G A T C A G T C A G C T G T A C C G T A A G T C C G A T A C T G C G T A A T C G G T C A A C G T A C G T A C G T
C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T

ZIC3/MA0697.1/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TCCTCACTGAGMT
GACCCCCCGCTGCGC-
 A C G T A C G T A C G T A G C T G A T C A G T C A G C T G T A C C G T A A G T C C G A T A C T G C G T A A T C G G T C A A C G T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-TCCTCACTGAGMT-
TCNCCTGCTGNGNNN
 A C G T A G C T G A T C A G T C A G C T G T A C C G T A A G T C C G A T A C T G C G T A A T C G G T C A A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0207.1_Zic3_2/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-TCCTCACTGAGMT-
NNTCCTGCTGTGNNN
 A C G T A G C T G A T C A G T C A G C T G T A C C G T A A G T C C G A T A C T G C G T A A T C G G T C A A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C