Information for 7-CTGGGTGGCTTGG (Motif 8)

T A G C A C G T A C T G A C T G A C T G C G A T A C T G A C T G A G T C A C G T A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C G T C A C G T A A C T G A G T C A G T C C G T A A G T C A G T C A G T C G T C A A C T G
p-value:1e-11
log p-value:-2.670e+01
Information Content per bp:1.905
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.7 +/- 21.4bp
Average Position of motif in Background42.4 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RREB1/MA0073.1/Jaspar

Match Rank:1
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----CTGGGTGGCTTGG--
NGGGGGGGGGTGGTTTGGGG
 A C G T A C G T A C G T A C G T A C G T T A G C A C G T A C T G A C T G A C T G C G A T A C T G A C T G A G T C A C G T A C G T A C T G A C T G A C G T A C G T
A C G T A T C G C A T G A C T G C A T G A C T G A C T G A C T G A C T G A C T G A C G T A C T G C A T G A C G T A C G T A C G T A C T G A C T G A C T G A C T G

PB0029.1_Hic1_1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CTGGGTGGCTTGG-
NGTAGGTTGGCATNNN
 A C G T A C G T T A G C A C G T A C T G A C T G A C T G C G A T A C T G A C T G A G T C A C G T A C G T A C T G A C T G A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

KLF16/MA0741.1/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CTGGGTGGCTTGG-
---GGGGGCGTGGC
 T A G C A C G T A C T G A C T G A C T G C G A T A C T G A C T G A G T C A C G T A C G T A C T G A C T G A C G T
A C G T A C G T A C G T C T A G C A T G C T A G A T C G A C T G G A T C C A T G A C G T C A T G C A T G A G T C

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTGGGTGGCTTGG
CGTGGGTGGTCC--
 A C G T T A G C A C G T A C T G A C T G A C T G C G A T A C T G A C T G A G T C A C G T A C G T A C T G A C T G
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTGGGTGGCTTGG
CTTGAGTGGCT---
 A C G T T A G C A C G T A C T G A C T G A C T G C G A T A C T G A C T G A G T C A C G T A C G T A C T G A C T G
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T

SP3/MA0746.1/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CTGGGTGGCTTGG-
---GGGGGCGTGGN
 T A G C A C G T A C T G A C T G A C T G C G A T A C T G A C T G A G T C A C G T A C G T A C T G A C T G A C G T
A C G T A C G T A C G T C T A G C A T G T C A G C A T G C A T G G A T C C T A G A C G T C A T G C A T G A T G C

SP8/MA0747.1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CTGGGTGGCTTGG-
--AGTGGGCGTGGC
 T A G C A C G T A C T G A C T G A C T G C G A T A C T G A C T G A G T C A C G T A C G T A C T G A C T G A C G T
A C G T A C G T C T G A T C A G A C G T T C A G A T C G A T C G T G A C C A T G C A G T C A T G C A T G A G T C

KLF14/MA0740.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTGGGTGGCTTGG--
-AAGGGGGCGTGGCC
 T A G C A C G T A C T G A C T G A C T G C G A T A C T G A C T G A G T C A C G T A C G T A C T G A C T G A C G T A C G T
A C G T C T G A C T G A C T A G C A T G T C A G T C A G A T C G A G T C C A T G A C G T T C A G C A T G A G T C G T A C

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CTGGGTGGCTTGG-----
---KGTTGCTAGGMAACA
 T A G C A C G T A C T G A C T G A C T G C G A T A C T G A C T G A G T C A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTGGGTGGCTTGG----
NAGANTGGCGGGGNGNA
 T A G C A C G T A C T G A C T G A C T G C G A T A C T G A C T G A G T C A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A