Information for 5-GCTTTTGTTCCCTCMC (Motif 7)

A C T G G T A C G A C T A C G T A C G T A C G T C A T G A C G T A C G T A G T C A G T C A G T C A C G T A G T C G T A C A G T C
Reverse Opposite:
C T A G A C T G C T A G C G T A A C T G C T A G A C T G T C G A T C G A G T A C C G T A C G T A G T C A C G T A A C T G G T A C
p-value:1e-11
log p-value:-2.749e+01
Information Content per bp:1.754
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif7.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.5 +/- 17.5bp
Average Position of motif in Background56.0 +/- 16.8bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0118.1_Esrra_2/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCTTTTGTTCCCTCMC-
NNNNTTGACCCCTNNNN
 A C T G G T A C G A C T A C G T A C G T A C G T C A T G A C G T A C G T A G T C A G T C A G T C A C G T A G T C G T A C A G T C A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCTTTTGTTCCCTCMC
-CCTTTGTTTT-----
 A C T G G T A C G A C T A C G T A C G T A C G T C A T G A C G T A C G T A G T C A G T C A G T C A C G T A G T C G T A C A G T C
A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCTTTTGTTCCCTCMC
-YCTTTGTTCC-----
 A C T G G T A C G A C T A C G T A C G T A C G T C A T G A C G T A C G T A G T C A G T C A G T C A C G T A G T C G T A C A G T C
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:4
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GCTTTTGTTCCCTCMC
-----NCTTCCCGCCC
 A C T G G T A C G A C T A C G T A C G T A C G T C A T G A C G T A C G T A G T C A G T C A G T C A C G T A G T C G T A C A G T C
A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCTTTTGTTCCCTCMC
NCCATTGTTC------
 A C T G G T A C G A C T A C G T A C G T A C G T C A T G A C G T A C G T A G T C A G T C A G T C A C G T A G T C G T A C A G T C
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0107.1_Ascl2_2/Jaspar

Match Rank:6
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GCTTTTGTTCCCTCMC----
----CTATCCCCGCCCTATT
 A C T G G T A C G A C T A C G T A C G T A C G T C A T G A C G T A C G T A G T C A G T C A G T C A C G T A G T C G T A C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T T G C A C G A T G T A C T A G C G T A C T G A C C T A G A G T C G A T C G A T C A G C T C T G A A C G T G A C T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GCTTTTGTTCCCTCMC-
NNANTTGACCCCTNNNN
 A C T G G T A C G A C T A C G T A C G T A C G T C A T G A C G T A C G T A G T C A G T C A G T C A C G T A G T C G T A C A G T C A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GCTTTTGTTCCCTCMC
-CCWTTGTY-------
 A C T G G T A C G A C T A C G T A C G T A C G T C A T G A C G T A C G T A G T C A G T C A G T C A C G T A G T C G T A C A G T C
A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:9
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GCTTTTGTTCCCTCMC
-----TTCCCCCTAC-
 A C T G G T A C G A C T A C G T A C G T A C G T C A T G A C G T A C G T A G T C A G T C A G T C A C G T A G T C G T A C A G T C
A C G T A C G T A C G T A C G T A C G T A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GCTTTTGTTCCCTCMC
-CCATTGTTNY-----
 A C T G G T A C G A C T A C G T A C G T A C G T C A T G A C G T A C G T A G T C A G T C A G T C A C G T A G T C G T A C A G T C
A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T