p-value: | 1e-15 |
log p-value: | -3.485e+01 |
Information Content per bp: | 1.796 |
Number of Target Sequences with motif | 11.0 |
Percentage of Target Sequences with motif | 1.30% |
Number of Background Sequences with motif | 12.2 |
Percentage of Background Sequences with motif | 0.03% |
Average Position of motif in Targets | 48.4 +/- 22.5bp |
Average Position of motif in Background | 62.9 +/- 28.9bp |
Strand Bias (log2 ratio + to - strand density) | 0.8 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
REST/MA0138.2/Jaspar
Match Rank: | 1 |
Score: | 0.82 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AGCACCTTGGACA----- TTCAGCACCATGGACAGCGCC |
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REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer
Match Rank: | 2 |
Score: | 0.81 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AGCACCTTGGACA----- TCAGCACCATGGACAGCTCC |
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AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer
Match Rank: | 3 |
Score: | 0.58 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | AGCACCTTGGACA- ----CCAGGAACAG |
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Esrra/MA0592.2/Jaspar
Match Rank: | 4 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AGCACCTTGGACA ATGACCTTGAA-- |
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PB0152.1_Nkx3-1_2/Jaspar
Match Rank: | 5 |
Score: | 0.55 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------AGCACCTTGGACA ACTCCAAGTACTTGGAA-- |
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TCF3/MA0522.2/Jaspar
Match Rank: | 6 |
Score: | 0.54 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AGCACCTTGGACA AACACCTGCT--- |
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TCF4/MA0830.1/Jaspar
Match Rank: | 7 |
Score: | 0.54 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AGCACCTTGGACA CGCACCTGCT--- |
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PB0014.1_Esrra_1/Jaspar
Match Rank: | 8 |
Score: | 0.54 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----AGCACCTTGGACA NNNNATGACCTTGANTN |
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HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer
Match Rank: | 9 |
Score: | 0.54 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AGCACCTTGGACA--- TGGACTTTGNNCTNTG |
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HNF4G/MA0484.1/Jaspar
Match Rank: | 10 |
Score: | 0.53 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AGCACCTTGGACA-- TGGACTTTGNNCTCN |
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