Information for 10-CCGACGCGCG (Motif 20)

A G T C T G A C T C A G T C G A A G T C C T A G A G T C C T A G A G T C A C T G
Reverse Opposite:
G T A C A C T G G A T C A C T G A G T C A C T G A G C T A G T C A C T G A C T G
p-value:1e-8
log p-value:-1.964e+01
Information Content per bp:1.842
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.77%
Number of Background Sequences with motif113.0
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets52.2 +/- 27.0bp
Average Position of motif in Background50.4 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0095.1_Zfp161_1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CCGACGCGCG-----
NCANGCGCGCGCGCCA
 A C G T A G T C T G A C T C A G T C G A A G T C C T A G A G T C C T A G A G T C A C T G A C G T A C G T A C G T A C G T A C G T
G C A T G A T C C T G A C T A G C T A G G A T C T C A G G A T C C T A G A G T C C T A G A G T C T A C G G A T C G A T C G T C A

Tcfl5/MA0632.1/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CCGACGCGCG--
--GGCACGTGCC
 A G T C T G A C T C A G T C G A A G T C C T A G A G T C C T A G A G T C A C T G A C G T A C G T
A C G T A C G T C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C

EGR2/MA0472.2/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCGACGCGCG
ACGCCCACGCA--
 A C G T A C G T A C G T A G T C T G A C T C A G T C G A A G T C C T A G A G T C C T A G A G T C A C T G
G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A A C G T A C G T

Hes1/MA1099.1/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CCGACGCGCG--
--GGCACGCGTC
 A G T C T G A C T C A G T C G A A G T C C T A G A G T C C T A G A G T C A C T G A C G T A C G T
A C G T A C G T T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C

PB0008.1_E2F2_1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CCGACGCGCG-------
--NTCGCGCGCCTTNNN
 A G T C T G A C T C A G T C G A A G T C C T A G A G T C C T A G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

PB0151.1_Myf6_2/Jaspar

Match Rank:6
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CCGACGCGCG
AGCAACAGCCGCACC
 A C G T A C G T A C G T A C G T A C G T A G T C T G A C T C A G T C G A A G T C C T A G A G T C C T A G A G T C A C T G
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

PB0009.1_E2F3_1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCGACGCGCG-------
--ANCGCGCGCCCTTNN
 A G T C T G A C T C A G T C G A A G T C C T A G A G T C C T A G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCGACGCGCG
CCAGACRSVB-
 A C G T A G T C T G A C T C A G T C G A A G T C C T A G A G T C C T A G A G T C A C T G
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T

PB0179.1_Sp100_2/Jaspar

Match Rank:9
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------CCGACGCGCG
NNTTTANNCGACGNA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C T G A C T C A G T C G A A G T C C T A G A G T C C T A G A G T C A C T G
T A G C G C A T C G A T C G A T C G A T G T C A T G C A C A T G A G T C A C T G C G T A A G T C C T A G T A C G T C G A A C G T A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:10
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CCGACGCGCG
YCCGCCCACGCN--
 A C G T A C G T A C G T A C G T A G T C T G A C T C A G T C G A A G T C C T A G A G T C C T A G A G T C A C T G
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A A C G T A C G T