Information for 18-CTTCAGTTAC (Motif 28)

A T G C A C G T A C G T A G T C C G T A A C T G A C G T C G A T C G T A A T G C
Reverse Opposite:
A T C G A C G T C G T A C G T A G T A C C G A T A C T G G T C A C G T A A T C G
p-value:1e-6
log p-value:-1.515e+01
Information Content per bp:1.837
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif24.6
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets34.6 +/- 24.0bp
Average Position of motif in Background60.9 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CTTCAGTTAC
BRRCVGTTDN
 A T G C A C G T A C G T A G T C C G T A A C T G A C G T C G A T C G T A A T G C
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G

Barhl1/MA0877.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTTCAGTTAC-
-NNCAATTANN
 A T G C A C G T A C G T A G T C C G T A A C T G A C G T C G A T C G T A A T G C A C G T
A C G T T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CTTCAGTTAC
--BCMATTAG
 A T G C A C G T A C G T A G T C C G T A A C T G A C G T C G A T C G T A A T G C
A C G T A C G T A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTTCAGTTAC-
-TKCTGTTCCA
 A T G C A C G T A C G T A G T C C G T A A C T G A C G T C G A T C G T A A T G C A C G T
A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A

PH0167.1_Tcf1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTTCAGTTAC------
NTTTTAGTTAACNNAGN
 A C G T A T G C A C G T A C G T A G T C C G T A A C T G A C G T C G A T C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T
T G C A G A C T G C A T A C G T G A C T C T G A A T C G G C A T C G A T C G T A C T G A T A G C A G C T T C G A T G C A T A C G C T A G

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTTCAGTTAC
-GGCVGTTR-
 A T G C A C G T A C G T A G T C C G T A A C T G A C G T C G A T C G T A A T G C
A C G T C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T

ISL2/MA0914.1/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CTTCAGTTAC
--GCACTTAA
 A T G C A C G T A C G T A G T C C G T A A C T G A C G T C G A T C G T A A T G C
A C G T A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CTTCAGTTAC
ACTTTCACTTTC
 A C G T A C G T A T G C A C G T A C G T A G T C C G T A A C T G A C G T C G A T C G T A A T G C
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CTTCAGTTAC
AGTTTCAGTTTC
 A C G T A C G T A T G C A C G T A C G T A G T C C G T A A C T G A C G T C G A T C G T A A T G C
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C

BARHL2/MA0635.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTTCAGTTAC-
-ANCGTTTANN
 A T G C A C G T A C G T A G T C C G T A A C T G A C G T C G A T C G T A A T G C A C G T
A C G T C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C