Information for 10-CGTCCCGCCCCTCCCT (Motif 20)

A G T C T C A G A C G T A G T C A T G C A G T C A C T G A G T C A G T C A T G C A T G C A C G T A G T C A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A C T G C G T A A T C G A T C G A C T G A C T G A G T C A C T G A T C G A C T G G T C A A G T C A C T G
p-value:1e-9
log p-value:-2.171e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.1 +/- 25.0bp
Average Position of motif in Background59.7 +/- 22.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SP2/MA0516.1/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CGTCCCGCCCCTCCCT
-GCCCCGCCCCCTCCC
 A G T C T C A G A C G T A G T C A T G C A G T C A C T G A G T C A G T C A T G C A T G C A C G T A G T C A G T C A G T C A C G T
A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

PB0202.1_Zfp410_2/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CGTCCCGCCCCTCCCT
TCACCCCGCCCCAAATT
 A C G T A G T C T C A G A C G T A G T C A T G C A G T C A C T G A G T C A G T C A T G C A T G C A C G T A G T C A G T C A G T C A C G T
A G C T G A T C G T C A A G T C G A T C A G T C A G T C A C T G T G A C A G T C T G A C A T G C C G A T G C T A G T C A G A C T G C A T

KLF5/MA0599.1/Jaspar

Match Rank:3
Score:0.68
Offset:6
Orientation:forward strand
Alignment:CGTCCCGCCCCTCCCT
------GCCCCGCCCC
 A G T C T C A G A C G T A G T C A T G C A G T C A C T G A G T C A G T C A T G C A T G C A C G T A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CGTCCCGCCCCTCCCT
TACGCCCCGCCACTCTG-
 A C G T A C G T A G T C T C A G A C G T A G T C A T G C A G T C A C T G A G T C A G T C A T G C A T G C A C G T A G T C A G T C A G T C A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G A C G T

Klf4/MA0039.2/Jaspar

Match Rank:5
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:CGTCCCGCCCCTCCCT
------GCCCCACCCA
 A G T C T C A G A C G T A G T C A T G C A G T C A C T G A G T C A G T C A T G C A T G C A C G T A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T G A C G A T C T G A C G T A C C T G A T A G C A G T C A G T C G C T A

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:6
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:CGTCCCGCCCCTCCCT
------GCCMCRCCCH
 A G T C T C A G A C G T A G T C A T G C A G T C A C T G A G T C A G T C A T G C A T G C A C G T A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T

Sp1(Zf)/Promoter/Homer

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CGTCCCGCCCCTCCCT
GGCCCCGCCCCC----
 A G T C T C A G A C G T A G T C A T G C A G T C A C T G A G T C A G T C A T G C A T G C A C G T A G T C A G T C A G T C A C G T
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T A C G T A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CGTCCCGCCCCTCCCT
ATCCCCGCCCCTAAAA
 A G T C T C A G A C G T A G T C A T G C A G T C A C T G A G T C A G T C A T G C A T G C A C G T A G T C A G T C A G T C A C G T
G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.63
Offset:7
Orientation:reverse strand
Alignment:CGTCCCGCCCCTCCCT
-------CCCCCCCC-
 A G T C T C A G A C G T A G T C A T G C A G T C A C T G A G T C A G T C A T G C A T G C A C G T A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A T G C A G T C A G T C G A T C A G T C A G T C A C G T

SP1/MA0079.3/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CGTCCCGCCCCTCCCT
-GCCCCGCCCCC----
 A G T C T C A G A C G T A G T C A T G C A G T C A C T G A G T C A G T C A T G C A T G C A C G T A G T C A G T C A G T C A C G T
A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T A C G T A C G T A C G T