Information for 9-GTGGCACTGAGAACTT (Motif 17)

A C T G C G A T A C T G T A C G A G T C C G T A A G T C A G C T A C T G C T G A A C T G C G T A C G T A A G T C A C G T A C G T
Reverse Opposite:
C G T A G T C A A C T G A C G T A C G T A G T C A G C T A G T C C T G A C T A G C G A T A C T G A G T C A G T C C G T A A G T C
p-value:1e-9
log p-value:-2.276e+01
Information Content per bp:1.899
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.8 +/- 23.6bp
Average Position of motif in Background38.2 +/- 17.8bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:1
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GTGGCACTGAGAACTT
KGTTGCCATGGCAAC--
 A C G T A C T G C G A T A C T G T A C G A G T C C G T A A G T C A G C T A C T G C T G A A C T G C G T A C G T A A G T C A C G T A C G T
A C T G C T A G A G C T G A C T C A T G A G T C A G T C G T C A C A G T C T A G T C A G G T A C C T G A T C G A G A T C A C G T A C G T

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:2
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GTGGCACTGAGAACTT
CGGTTGCCATGGCAAC--
 A C G T A C G T A C T G C G A T A C T G T A C G A G T C C G T A A G T C A G C T A C T G C T G A A C T G C G T A C G T A A G T C A C G T A C G T
A G T C A T C G C T A G A G C T G A C T C T A G A G T C A G T C G C T A C A G T T C A G T C A G G A T C C T G A T C G A G A T C A C G T A C G T

RFX4/MA0799.1/Jaspar

Match Rank:3
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GTGGCACTGAGAACTT
CGTTGCCATGGCAACG-
 A C G T A C T G C G A T A C T G T A C G A G T C C G T A A G T C A G C T A C T G C T G A A C T G C G T A C G T A A G T C A C G T A C G T
A T G C C T A G G C A T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A T C G A G A T C T A C G A C G T

PH0112.1_Nkx2-3/Jaspar

Match Rank:4
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GTGGCACTGAGAACTT----
----CNTTAAGTACTTAANG
 A C T G C G A T A C T G T A C G A G T C C G T A A G T C A G C T A C T G C T G A A C T G C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G

PB0099.1_Zfp691_1/Jaspar

Match Rank:5
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GTGGCACTGAGAACTT----
---NNNNTGAGCACTGTNNG
 A C T G C G A T A C T G T A C G A G T C C G T A A G T C A G C T A C T G C T G A A C T G C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

RFX2/MA0600.2/Jaspar

Match Rank:6
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GTGGCACTGAGAACTT
CGTTGCCATGGCAACG-
 A C G T A C T G C G A T A C T G T A C G A G T C C G T A A G T C A G C T A C T G C T G A A C T G C G T A C G T A A G T C A C G T A C G T
A T G C T C A G G A C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C T G A G A T C T A C G A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:7
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GTGGCACTGAGAACTT
GTTGCCATGGNAAC--
 A C T G C G A T A C T G T A C G A G T C C G T A A G T C A G C T A C T G C T G A A C T G C G T A C G T A A G T C A C G T A C G T
A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C A C G T A C G T

RFX3/MA0798.1/Jaspar

Match Rank:8
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-GTGGCACTGAGAACTT
CGTTGCCATGGCAACG-
 A C G T A C T G C G A T A C T G T A C G A G T C C G T A A G T C A G C T A C T G C T G A A C T G C G T A C G T A A G T C A C G T A C G T
A T G C C T A G G A C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A T C G A G A T C T A C G A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:GTGGCACTGAGAACTT
-----CSTGGGAAAD-
 A C T G C G A T A C T G T A C G A G T C C G T A A G T C A G C T A C T G C T G A A C T G C G T A C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T

RFX5/MA0510.2/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-GTGGCACTGAGAACTT
CGTTGCCATGGCAACG-
 A C G T A C T G C G A T A C T G T A C G A G T C C G T A A G T C A G C T A C T G C T G A A C T G C G T A C G T A A G T C A C G T A C G T
A T G C C T A G A G C T G A C T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C T G A T G C A G A T C T A C G A C G T