Information for 5-TAATGVCAAG (Motif 7)

G A C T G T C A T G C A C A G T C T A G T G C A G T A C G T C A T G C A C T A G
Reverse Opposite:
G A T C A C G T C A G T C A T G A C G T G A T C G T C A A C G T C A G T C T G A
p-value:1e-12
log p-value:-2.769e+01
Information Content per bp:1.579
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.91%
Number of Background Sequences with motif75.2
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets60.2 +/- 28.6bp
Average Position of motif in Background49.9 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TAATGVCAAG-
-GGTGCCAAGT
 G A C T G T C A T G C A C A G T C T A G T G C A G T A C G T C A T G C A C T A G A C G T
A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

PB0119.1_Foxa2_2/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TAATGVCAAG---
AAAAATAACAAACGG
 A C G T A C G T G A C T G T C A T G C A C A G T C T A G T G C A G T A C G T C A T G C A C T A G A C G T A C G T A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TAATGVCAAG
--TTGCCAAG
 G A C T G T C A T G C A C A G T C T A G T G C A G T A C G T C A T G C A C T A G
A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TAATGVCAAG
-CGTGCCAAG
 G A C T G T C A T G C A C A G T C T A G T G C A G T A C G T C A T G C A C T A G
A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TAATGVCAAG
-RHTGWCAR-
 G A C T G T C A T G C A C A G T C T A G T G C A G T A C G T C A T G C A C T A G
A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TAATGVCAAG
---TGCCAA-
 G A C T G T C A T G C A C A G T C T A G T G C A G T A C G T C A T G C A C T A G
A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TAATGVCAAG
GKTAATGR----
 A C G T A C G T G A C T G T C A T G C A C A G T C T A G T G C A G T A C G T C A T G C A C T A G
A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TAATGVCAAG
--TTGACAG-
 G A C T G T C A T G C A C A G T C T A G T G C A G T A C G T C A T G C A C T A G
A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TAATGVCAAG---
--AAGGCAAGTGT
 G A C T G T C A T G C A C A G T C T A G T G C A G T A C G T C A T G C A C T A G A C G T A C G T A C G T
A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TAATGVCAAG-
--ATGCCAACC
 G A C T G T C A T G C A C A G T C T A G T G C A G T A C G T C A T G C A C T A G A C G T
A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C