Information for 4-TCAGGCGCAGTCACCT (Motif 5)

A C G T G T A C G T C A A C T G A C T G A G T C A C T G A G T C G T C A A C T G C G A T A G T C C G T A A G T C A G T C G C A T
Reverse Opposite:
C G T A T A C G A C T G A C G T A C T G C G T A A G T C A C G T A C T G G T A C A C T G A G T C A G T C A C G T A C T G T C G A
p-value:1e-13
log p-value:-3.206e+01
Information Content per bp:1.905
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.3 +/- 25.2bp
Average Position of motif in Background68.9 +/- 22.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1/MA0506.1/Jaspar

Match Rank:1
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TCAGGCGCAGTCACCT
---TGCGCAGGCGC--
 A C G T G T A C G T C A A C T G A C T G A G T C A C T G A G T C G T C A A C T G C G A T A G T C C G T A A G T C A G T C G C A T
A C G T A C G T A C G T A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TCAGGCGCAGTCACCT
GCGCATGCGCAG------
 A C G T A C G T A C G T G T A C G T C A A C T G A C T G A G T C A C T G A G T C G T C A A C T G C G A T A G T C C G T A A G T C A G T C G C A T
T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:3
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TCAGGCGCAGTCACCT--
--TGACCCAGTGACCTAC
 A C G T G T A C G T C A A C T G A C T G A G T C A C T G A G T C G T C A A C T G C G A T A G T C C G T A A G T C A G T C G C A T A C G T A C G T
A C G T A C G T G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:4
Score:0.53
Offset:3
Orientation:forward strand
Alignment:TCAGGCGCAGTCACCT-
---AGGTCANTGACCTN
 A C G T G T A C G T C A A C T G A C T G A G T C A C T G A G T C G T C A A C T G C G A T A G T C C G T A A G T C A G T C G C A T A C G T
A C G T A C G T A C G T T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TCAGGCGCAGTCACCT----
YCAGGCWCAGTACCAGGCTC
 A C G T G T A C G T C A A C T G A C T G A G T C A C T G A G T C G T C A A C T G C G A T A G T C C G T A A G T C A G T C G C A T A C G T A C G T A C G T A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

POL006.1_BREu/Jaspar

Match Rank:6
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TCAGGCGCAGTCACCT
---GGCGCGCT-----
 A C G T G T A C G T C A A C T G A C T G A G T C A C T G A G T C G T C A A C T G C G A T A G T C C G T A A G T C A G T C G C A T
A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:7
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:TCAGGCGCAGTCACCT----
----NNGGCGACACCTCNNN
 A C G T G T A C G T C A A C T G A C T G A G T C A C T G A G T C G T C A A C T G C G A T A G T C C G T A A G T C A G T C G C A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TCAGGCGCAGTCACCT
TCAGNGAGCGTGAC--
 A C G T G T A C G T C A A C T G A C T G A G T C A C T G A G T C G T C A A C T G C G A T A G T C C G T A A G T C A G T C G C A T
A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C A C G T A C G T

USF2/MA0526.1/Jaspar

Match Rank:9
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:TCAGGCGCAGTCACCT---
--------GGTCACATGAC
 A C G T G T A C G T C A A C T G A C T G A G T C A C T G A G T C G T C A A C T G C G A T A G T C C G T A A G T C A G T C G C A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C

NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:TCAGGCGCAGTCACCT
---TGCTGAGTCATC-
 A C G T G T A C G T C A A C T G A C T G A G T C A C T G A G T C G T C A A C T G C G A T A G T C C G T A A G T C A G T C G C A T
A C G T A C G T A C G T G C A T A T C G G T A C G C A T C A T G G C T A T A C G C G A T G T A C G C T A A G C T A T G C A C G T