Information for 3-CTGTCCAWGGTSCTGA (Motif 6)

A G T C A C G T A T C G A G C T A G T C G T A C C G T A C G A T A C T G A C T G A C G T A T C G A G T C A C G T A C T G T G C A
Reverse Opposite:
A C G T A G T C G T C A C T A G T A G C C G T A A G T C A G T C C G T A G A C T A C T G A C T G C T G A A T G C C G T A T C A G
p-value:1e-22
log p-value:-5.179e+01
Information Content per bp:1.743
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.97%
Number of Background Sequences with motif16.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets61.2 +/- 18.2bp
Average Position of motif in Background34.2 +/- 21.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST/MA0138.2/Jaspar

Match Rank:1
Score:0.93
Offset:-4
Orientation:reverse strand
Alignment:----CTGTCCAWGGTSCTGA-
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A C G T A C G T A G T C A C G T A T C G A G C T A G T C G T A C C G T A C G A T A C T G A C T G A C G T A T C G A G T C A C G T A C T G T G C A A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:2
Score:0.92
Offset:-4
Orientation:forward strand
Alignment:----CTGTCCAWGGTSCTGA
GGAGCTGTCCATGGTGCTGA
 A C G T A C G T A C G T A C G T A G T C A C G T A T C G A G C T A G T C G T A C C G T A C G A T A C T G A C T G A C G T A T C G A G T C A C G T A C T G T G C A
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

PB0014.1_Esrra_1/Jaspar

Match Rank:3
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CTGTCCAWGGTSCTGA--
-TATTCAAGGTCATGCGA
 A G T C A C G T A T C G A G C T A G T C G T A C C G T A C G A T A C T G A C T G A C G T A T C G A G T C A C G T A C T G T G C A A C G T A C G T
A C G T C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

Esrra/MA0592.2/Jaspar

Match Rank:4
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CTGTCCAWGGTSCTGA
---TTCAAGGTCAT--
 A G T C A C G T A T C G A G C T A G T C G T A C C G T A C G A T A C T G A C T G A C G T A T C G A G T C A C G T A C T G T G C A
A C G T A C G T A C G T A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CTGTCCAWGGTSCTGA
CTGTTCCTGG------
 A G T C A C G T A T C G A G C T A G T C G T A C C G T A C G A T A C T G A C T G A C G T A T C G A G T C A C G T A C T G T G C A
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.51
Offset:10
Orientation:forward strand
Alignment:CTGTCCAWGGTSCTGA----
----------TGCTGACTCA
 A G T C A C G T A T C G A G C T A G T C G T A C C G T A C G A T A C T G A C T G A C G T A T C G A G T C A C G T A C T G T G C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:7
Score:0.51
Offset:8
Orientation:forward strand
Alignment:CTGTCCAWGGTSCTGA----
--------GGTGYTGACAGS
 A G T C A C G T A T C G A G C T A G T C G T A C C G T A C G A T A C T G A C T G A C G T A T C G A G T C A C G T A C T G T G C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CTGTCCAWGGTSCTGA
CTGACCTTTG------
 A G T C A C G T A T C G A G C T A G T C G T A C C G T A C G A T A C T G A C T G A C G T A T C G A G T C A C G T A C T G T G C A
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:9
Score:0.50
Offset:3
Orientation:forward strand
Alignment:CTGTCCAWGGTSCTGA---
---GCGGAGGTGTCGCCTC
 A G T C A C G T A T C G A G C T A G T C G T A C C G T A C G A T A C T G A C T G A C G T A T C G A G T C A C G T A C T G T G C A A C G T A C G T A C G T
A C G T A C G T A C G T T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

MAFK/MA0496.1/Jaspar

Match Rank:10
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:CTGTCCAWGGTSCTGA-----
------AAANTGCTGACTNAG
 A G T C A C G T A T C G A G C T A G T C G T A C C G T A C G A T A C T G A C T G A C G T A T C G A G T C A C G T A C T G T G C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G