Information for 13-GCTHCAGCCA (Motif 17)

T C A G G A T C A C G T G A C T G T A C T G C A A C T G G T A C A G T C C G T A
Reverse Opposite:
A C G T T C A G A C T G A G T C A C G T A C T G C T G A C G T A C T A G A G T C
p-value:1e-8
log p-value:-1.924e+01
Information Content per bp:1.736
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.83%
Number of Background Sequences with motif297.8
Percentage of Background Sequences with motif0.63%
Average Position of motif in Targets56.5 +/- 26.8bp
Average Position of motif in Background48.6 +/- 32.1bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL011.1_XCPE1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GCTHCAGCCA
GGTCCCGCCC
 T C A G G A T C A C G T G A C T G T A C T G C A A C T G G T A C A G T C C G T A
A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C

E2F4/MA0470.1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCTHCAGCCA
NNTTCCCGCCC
 A C G T T C A G G A T C A C G T G A C T G T A C T G C A A C T G G T A C A G T C C G T A
A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCTHCAGCCA-
-TTCCCGCCWG
 T C A G G A T C A C G T G A C T G T A C T G C A A C T G G T A C A G T C C G T A A C G T
A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCTHCAGCCA
NYTTCCCGCC-
 A C G T T C A G G A T C A C G T G A C T G T A C T G C A A C T G G T A C A G T C C G T A
T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C A C G T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:GCTHCAGCCA-
-----TGCCAA
 T C A G G A T C A C G T G A C T G T A C T G C A A C T G G T A C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCTHCAGCCA--
TTTCCCGCCMAV
 T C A G G A T C A C G T G A C T G T A C T G C A A C T G G T A C A G T C C G T A A C G T A C G T
C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C

POL008.1_DCE_S_I/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCTHCAGCCA
GCTTCC----
 T C A G G A T C A C G T G A C T G T A C T G C A A C T G G T A C A G T C C G T A
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCTHCAGCCA
NCTTCCCGCCC
 A C G T T C A G G A T C A C G T G A C T G T A C T G C A A C T G G T A C A G T C C G T A
A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GCTHCAGCCA--
---CGTGCCAAG
 T C A G G A T C A C G T G A C T G T A C T G C A A C T G G T A C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCTHCAGCCA
GCTCCG----
 T C A G G A T C A C G T G A C T G T A C T G C A A C T G G T A C A G T C C G T A
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T